Paracoccus sediminicola: PAF18_11190
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Entry
PAF18_11190 CDS
T09284
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00260
Glycine, serine and threonine metabolism
pdim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAF18_11190
Enzymes [BR:
pdim01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PAF18_11190
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PAF18_11190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
Pyr_redox_3
FAD_oxidored
NAD_binding_8
HI0933_like
FAD_binding_2
Thi4
DAO
FAD_binding_3
Lycopene_cycl
AlaDh_PNT_C
GIDA
Pyr_redox
Fer2_BFD
NAD_binding_9
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
WBU56054
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All DBs
Position
2255713..2258712
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AA seq
999 aa
AA seq
DB search
MSFRIPGKGRVDHAQPVGFHFDGVEYQGLAGDTVASALLANGVHLMGRSFKYHRPRGPVA
AGSEEPNALIGTSRGPGRAEPNTRATMQEIWPGLRSVSQNRYPGLTFDIGAANDAVSPLF
SAGFYYKTFKWPQSFWHRVYEPFIRAAAGLGTAPDHEDPDHYASRYLHCDLLIVGAGPAG
LAAAEAASEQGLSVVIVDENAEAGGTLLSEPQAVIDGRPAWNWLAAALDRLRAAGVRVMT
RTTAIGYYHQNMIGMVERLTDHLPEPNPDLPRERLWRVRARQVVLAQGALEKPLVFSGND
RPGVMLAGSAQSYLHRFGVRVGNEAVVVTSHDSAWHAAFDLSDAGTRVKAIIDTRQQVSE
DLASAARLRGIHVRLSHSVTATGGRLRVAHVTVNPVQGGTVGAGERIYCDCLLMSGGWTP
SLHLFSHTKGSLQWDDDLTTFLPKDTPEDCVIAGAGRGLWGIEAALNDGAEQGRAAVQAL
GGAGGARRYAVDHDRTGSGETMRELPTDRDPSRVKAFVDFQNDVTAKDLRLAVREGMRSI
EHVKRYTTNGMATDQGKMSNINGLNIAADALGKPQPQVGLTTFRPPYTPTSFGAFAGYHR
GDHFELTRKTQIDPWAEEKGAVFENVGQWRRARYFPQPGEDMDAAVRRECAATRGGVGIF
DASTLGKIEVVGPDAVEFMNRIYTNPWTKLAPGRCRYGLLLGDDGFIRDDGVIGRLSQDR
FHVTTTTGGAARVMNMMEDYLQTEWPDLDVWLTSTTEQFSTIALNGPRAAALLQPLVEAV
TLSDDDFPHMSCAECVVAGLPARLFRLSFTGEVGFEINVAAPYGRQLWETLWQAGQKHGI
CAYGTETMHVLRAEKGYIIVGQDTDGTVTPYDAGMGWAVGKKKPDFVGMRGLMRPDLVAE
GRKQLVGLLTEDRSKLEEGAQIVLDPDQPVPMKMVGHVTSSYDQGTTGRPIALALIEGGH
DRMGERVHIPMPDRVIAAKIVPTVFHDPENARLKIGAEG
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcgcatccccggcaagggccgtgtcgatcacgcgcagccagtcggtttccac
ttcgacggcgtggagtatcagggcctcgcgggcgacacggtcgcctcggcgctgctggcc
aatggcgtccatctgatggggcggtccttcaagtatcatcgcccgcgcggcccggtcgcg
gcagggtccgaggaacccaatgcgctgatcggcacaagccgcgggccgggccgggccgag
cccaatacccgcgccaccatgcaggaaatctggcccgggctgcggtcggtgtcgcagaac
cgctatccaggcctgacattcgacatcggcgcggcgaatgacgcggtctcgccgctgttt
tcggcggggttttattacaagaccttcaaatggccgcaaagcttctggcaccgcgtctat
gaacccttcatccgcgccgccgccggtctgggcaccgcgccggatcacgaagaccccgat
cactacgcttcgcgctatctgcattgcgatctgctgatcgtcggcgccggtccggcgggg
ctggcggcggcagaggcggcgtcggaacagggcctctcggtcgtgatcgtcgatgagaat
gccgaggccggcggcacgctgctgtctgaacctcaagccgtgatcgacgggcggcccgca
tggaactggctggcggctgcgcttgaccgactgcgcgcggcaggggtgcgggtgatgacc
cggaccacggcgatcggctattaccaccagaacatgatcggcatggtcgagcggctgacc
gaccatttgcccgaaccgaaccccgatctgccgcgcgaacggctgtggcgggtcagggcg
cgacaggtggtgctggcgcagggggccttggaaaagcccctcgtgttcagtggcaatgac
cggcccggcgtgatgctggcgggatctgcgcagagctatctgcaccgcttcggcgtgcgg
gtcggcaatgaggcggtggtcgtcaccagccatgacagcgcctggcacgcggccttcgat
ctgagcgatgcgggcacgcgggtcaaggcgatcatcgacacacggcagcaggtctcggag
gatctggcatcggcggcaaggctgcggggcatccatgtccgcctgtcccacagcgtcacc
gcgactggcgggcggctgcgtgtcgcgcatgtgacggtgaacccggttcagggcggcacg
gtcggcgcgggtgagcggatctattgcgactgcctgctgatgtccgggggctggacgccc
tcgctgcatctcttctcgcatacgaagggcagcctgcaatgggatgacgacctgaccacc
ttcctgccgaaagacacgcccgaagattgcgtgatcgcgggcgccgggcgcggtctctgg
gggatcgaggcggcgctgaatgacggcgccgaacagggccgggcggcggtgcaggcgctc
gggggcgcgggcggcgcgcggcgctatgccgtcgatcacgaccgcaccggcagcggcgag
accatgcgagagcttcccaccgaccgcgacccatcccgcgtcaaggccttcgtcgacttc
cagaatgacgtgaccgccaaggatctgcggctggcggtgcgcgaggggatgcgctcgatc
gagcatgtgaagcgctataccaccaatggcatggcgaccgatcagggcaagatgtccaat
atcaacgggctgaacatcgctgcagacgcgcttggcaagccgcagccgcaggtcgggctg
accacgttccgcccgccctatacgccgaccagcttcggcgccttcgccggctatcatcgc
ggcgatcatttcgagctcacccgcaagacccagatcgacccctgggccgaggaaaagggc
gcggtgttcgagaatgtcggccagtggcggcgggcgcgctatttcccgcagccgggcgaa
gacatggacgctgccgtgcgccgcgaatgtgcagcgacgcggggcggggtcgggatcttc
gacgcctcgaccctcggcaagatcgaggtggtcggcccggatgcggtcgaattcatgaat
cgcatctataccaacccctggaccaagctcgcgccgggccgctgccgctatgggctgctg
cttggcgatgacggcttcatccgcgatgacggggtgatcgggcggctgtcgcaggaccgg
ttccacgtcaccactaccaccggcggggcggcgcgggtgatgaacatgatggaggattac
cttcagaccgaatggcccgatctggatgtctggctgacctcgaccaccgaacagttctcg
accatcgcgctgaacggcccccgcgccgccgcgctgctgcaaccgctggtcgaagctgtc
acgctgagcgacgatgacttcccgcatatgtcctgcgccgagtgcgtggttgcgggactg
cccgcgcggctcttccggctcagcttcaccggcgaggtcgggttcgagatcaacgtcgca
gcaccctatggccgccagctgtgggagacgctgtggcaggccgggcagaagcacggcatc
tgcgcctatgggaccgagacgatgcatgtgctgcgcgccgagaaaggctatatcatcgtc
gggcaggacacggacggcacggtcacgccttacgatgccggtatgggctgggcggtcggc
aagaagaagcccgatttcgtcggcatgcgcgggctgatgcgtcccgatctggtggccgag
gggcgcaagcagcttgtcgggctgctgaccgaggatcgcagcaagctggaagagggcgct
cagatcgtgctcgacccggatcagccggtgccgatgaagatggtgggccatgtcacctca
tcctacgatcagggcacgaccgggcggcccatcgctctggcgctgatcgagggcgggcat
gaccggatgggcgagagggtgcatatccccatgcccgaccgggtgatcgcggcgaagatc
gtgccgaccgtgttccatgacccagagaatgcgcggctgaaaatcggggcggagggctga
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