Paracoccus sediminicola: PAF18_12185
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Entry
PAF18_12185 CDS
T09284
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdim03110
]
PAF18_12185 (clpB)
Chaperones and folding catalysts [BR:
pdim03110
]
Heat shock proteins
HSP100
PAF18_12185 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
IstB_IS21
TniB
Mg_chelatase
AAA_7
RuvB_N
AAA_18
AAA_14
Zeta_toxin
TsaE
NACHT
AAA_3
T2SSE
DUF7310
Bac_DnaA
AAA_25
Torsin
Motif
Other DBs
NCBI-ProteinID:
WBU56236
LinkDB
All DBs
Position
complement(2474351..2476990)
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AA seq
879 aa
AA seq
DB search
MDMEKFTERSRGFMQAAQTIAIREENQRVVPEHLLKALIDDDQGFATNLITKSGGDAKAV
RQAVDAAVAKLPKVSGGEGQVYVDPSLVRVLDEAQKLAQKAGDSFVPAERILTALAVANT
NAKDALAAGKVNAQSLNSAINDIRKGRTADSASAEDSYEALAKYARNLTEAAEAGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIDGDVPESLRNKQLWAL
DMGALIAGAKYRGEFEERLKAVLKEIENAAGEIVLFIDELHTLVGAGKTDGAMDAANLIK
PALARGELHCVGATTLDEYRKYIEKDAALARRFQPVMVEEPTVEDTISILRGIKEKYELH
HGVRVSDAALVAAAELSNRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRQIL
QMQIEAEALKKEDDAASKDRLERLEKELGDLTDRSKAMTARWQAERDKLEGARGLKEQLD
RARAELDQAKREGNLARAGELSYGIIPGLEKQLSDAEGDESADGVMVEEAVRPEQIAEVV
ERWTGIPTSKMLEGEREKLLKMEEILSQRVIGQDEAVTAIARSVRRARAGLNEESRPLGS
FLFLGPTGVGKTELTKAIAEYMFDDENAMIRIDMSEYMEKHSVARLIGAPPGYVGYDEGG
ALTEAVRRRPYSVILFDEVEKAHPDVFNVLLQVLDDGQLTDGQGRKVDFKNTLIVLTSNL
GSQSLSNLPDDADSTQARQEVMEAVRAHFRPEFLNRLDEMIIFRRLTRENMDGIVKIQLW
LLEQRLAARKITLDLDDKAMSWLADEGYDPVFGARPLKRVIQRALQDPLAEMLLSGEVLD
GQTVPVSANEDGLLVGDHVGTAGHKLGAVGEGPKDATLH
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaaaatttaccgagcgttcgcgtgggttcatgcaggccgctcagaccatt
gcgattcgcgaggaaaaccagcgtgtcgtgccggagcacctgctgaaggccctgatcgat
gacgatcagggatttgcaacaaatctgatcacgaaatccggtggtgatgccaaggccgtg
cgccaggctgtcgatgcggccgttgccaagctgcccaaagtctcgggcggcgaggggcag
gtctatgtcgacccgtcgctggtccgcgtgctggatgaggcgcagaagctcgctcagaaa
gcgggggacagtttcgttccggcagagcggattctgaccgcgcttgccgtggccaacacc
aatgccaaggatgcgctggctgccggcaaggtgaacgcgcaatctctgaacagcgccatc
aacgatattcgcaagggccgcaccgctgacagtgcgagcgccgaggacagctatgaggcg
ctggcgaaatacgcgcgcaacctgaccgaagccgccgaagcggggaagatcgacccgatc
atcggccgtgacgaggaaatccgccgcgccatgcaggtgctgagccgccgaaccaagaac
aacccggttctgatcggtgagccgggcgtcggcaagacggccatcgccgaagggctggcg
ctgcgcatcatcgatggcgacgtgccggaaagcctgcgcaacaagcagctttgggcgctg
gatatgggtgctctgattgccggggcgaaatatcgcggcgagttcgaggaacgtctcaag
gcggtgctgaaggaaatcgagaacgctgccggcgagattgtgctgttcatcgacgagctg
cacacgctggtcggtgctggcaagaccgacggcgcgatggatgccgcgaacctcatcaag
cctgcgctcgcacggggcgagctgcattgcgtcggcgccactacgctggacgaatatcgc
aaatatatcgagaaggacgcggcgcttgctcgtcgtttccagccggtgatggtcgaggaa
cccaccgtcgaggacacgatcagcattctgcgcggcatcaaggagaagtatgagcttcac
cacggggtgcgcgtctcggacgcggctctggtggccgcggccgagctgtcgaaccgctat
atcaccgaccgcttccttcccgacaaggcgatcgacctcgtggacgaggccgccagccgt
ctgcggatggaggtggacagcaaacccgaggagctggatgcgctcgaccggcagatcctg
caaatgcagatcgaggccgaggcgctgaagaaagaggacgatgcggccagcaaggatcgg
cttgaacggcttgagaaagaacttggcgatctgaccgaccggtccaaggcgatgactgcg
cgctggcaggccgaacgcgacaagctggaaggtgcgcgtgggctcaaggaacagctcgac
cgcgcccgtgccgagctggatcaggccaagcgcgagggcaatctcgcccgcgcgggcgag
ctgtcctatggcatcatccctgggttggagaagcagcttagcgatgcggaaggcgatgaa
agcgccgatggggtcatggtcgaggaagccgtccgtcccgagcaaatcgccgaagttgtc
gaacgctggaccggcatcccgaccagcaagatgctggagggcgagcgcgagaagctgctg
aagatggaagagatcctgtctcagcgtgtgatcgggcaggacgaggcggtgaccgccatt
gcccgctcggtccgccgtgcgcgtgcggggctgaacgaggaaagccgcccgctcgggtcg
ttcctcttcctcggcccgaccggtgtcggcaagaccgagctgaccaaggccatcgccgag
tatatgttcgacgacgagaacgcgatgatccgcatcgacatgtcggaatatatggagaag
cattcggtcgcccgtctgatcggcgcgcctcccggatatgtaggctatgacgaaggcggg
gcgctgaccgaggccgttcggcgcaggccctattcggtgatcctgtttgacgaggtcgaa
aaggcgcatcccgatgtgttcaatgtgctgctacaggtgctggatgacggtcagctgacc
gacgggcagggccgcaaggtcgatttcaagaacacgctgatcgtgttgacgtcgaatctc
ggcagccagtcgctgtcgaacctgcccgatgacgccgattccacgcaggcgcggcaagag
gtgatggaggcggtccgggcgcatttccggcccgagttcctgaaccgtctcgacgagatg
atcatattccgcagacttacgcgtgaaaacatggacggcatcgtaaagattcagctctgg
ctgctcgagcagcggcttgccgcgcgcaagatcacgctggatctggatgacaaggcgatg
agctggctggctgatgagggctatgatcccgtcttcggggcacggccgctcaaacgggtg
atacagcgggcactgcaggatccgctggccgagatgctgctttcgggcgaggtcctggat
ggccagaccgtgcccgtcagcgccaatgaagacgggttgctggtcggtgatcatgtcggc
accgccggacacaagcttggcgcggtgggcgaaggcccgaaggatgccacgctgcactga
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