Paracoccus sediminicola: PAF18_12490
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Entry
PAF18_12490 CDS
T09284
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pdim
Paracoccus sediminicola
Pathway
pdim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAF18_12490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdim02000
]
PAF18_12490
Transporters [BR:
pdim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PAF18_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
WBU56291
LinkDB
All DBs
Position
complement(2540143..2541171)
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AA seq
342 aa
AA seq
DB search
MNKRQLLLATILTTATSGAASAQEVLTVGGYGGSFETLMKELIIPQFEEANDVTITFVPG
NSTENLARLQAQQSAQELDVVILDDGPMYQADALGFCAPIEDAPVYADIYDIARLSDNAV
GVGFVATGFAYNAEWFEREGWEPPKSWEDLADPKYEQILSVPPISNTYGLHTLVMMARLN
GGGEDNIDPGFEAMANDVSPNVLVFEPSSGRMSELFQSEEIALSIWGSGRTKSLADTGFP
AKFAYPQEGAVALMLAACPVVDSDVPEKAQAFMQYLLDPEIQVRIGDAMGAGPVNTTSEL
PPELAEVLPYGDKIDDLLAVDWDVINPARQEWTARWAREVER
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgccagctattgctcgccacgatcctgacgaccgcgacatccggggctgcc
tccgcgcaggaggtgctgactgtcgggggttatggaggatcgttcgagacactcatgaag
gaactgatcataccgcagttcgaagaggccaacgacgtcacgattaccttcgtgcccgga
aactccaccgagaaccttgcgcggctccaggctcagcagagcgcgcaggagctggacgtc
gtgattctggatgacgggccgatgtatcaggccgatgcgctgggcttctgcgcccccatc
gaagatgcgccggtctatgctgatatctacgacattgctcggctgagcgacaacgctgtc
ggcgtcggctttgtcgccaccgggttcgcctacaatgcggaatggttcgaacgcgaaggc
tgggagcctccgaagagctgggaggatctcgccgatccgaaatacgagcagattctctct
gtgccgccgatctcgaacacatatgggctgcacacgctcgtgatgatggcccgactgaat
gggggcggggaggataacatcgaccctggattcgaagcgatggcgaatgatgttagcccg
aatgtgctggtcttcgagccatcttcgggtcgtatgtcggagctgttccagtccgaggag
atcgcgctctcgatctggggttcgggccgcacgaagtctttggccgataccggttttccg
gcgaaattcgcctatcctcaggaaggcgcggtcgcgctgatgctggcggcctgcccggtt
gtcgacagcgacgtgcccgaaaaggcgcaggccttcatgcagtatcttcttgacccggaa
atccaggtcaggatcggggatgcgatgggcgccggccccgtgaacaccacatccgaattg
ccgcccgagctggcagaggtgctgccctatggcgacaagatcgacgatcttctggcggtg
gattgggatgtgatcaatcccgcccgtcaggagtggactgcccgttgggcgcgcgaggtc
gagcgttaa
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