Paracoccus sediminicola: PAF18_12785
Help
Entry
PAF18_12785 CDS
T09284
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdim02000
]
PAF18_12785
Transporters [BR:
pdim02000
]
Other transporters
Pores ion channels [TC:
1
]
PAF18_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WBU56342
LinkDB
All DBs
Position
complement(2596476..2602490)
Genome browser
AA seq
2004 aa
AA seq
DB search
MIQRILIWLALVVMLPLGALAQDDPDEDATVAEISEQESDDEGFLTRFLQSRLSNAGRSV
EIDGFRGALSSRATFDSITIADADGVWLTLRDGAIQWNRSALLRGRVEVGELTADLIEIP
RPPVGEEEEEARAEARSFSLPELPVGIAIEQIEAGRVVLGSPLLGEEAEITVSGSMSLAG
GEGVADVVISRIDGKKGEFTFDGSFDNDSRVLNIDLSLDEDPNGIFSRIANLEGRPAVTA
QINGEGPLSDYQADIQLATDGVERITGDLTFLAEERGDANGNSFELTLGGDVATLLPPEN
REFFGESTQIVASGWRADSGRLEVDALDFDTDALKISGSLATNDQNAPQMLDLNVDFGQE
AGAKTLPVTIPFVDPPITVLSGNLDVGYNAAEGSDWALSGWLTEIDRDTTRLSRLDLDGE
GQVTLAEGDTLEQIDGTLSFDASGIELVSERIQNVVGDRISGVTGFDFTPGQVLRLSSME
ISGKDYGLDGALTVDGLASGIVLSTSGIVARHDNLSNLSELAGRSLSGRAEANMTGYFQA
LTGAFDIDGTVTGTDLAVDDPRLDNLLSGESTITVSAGRTEDGTELRDLSVNAQRISLDA
AGTINDDMVDLTANFDVPTLADLDPSFEGALSANARLTGTTGARQLAVTGQAAGLRTGID
ALDGAFAGETDLTAALRENGEGSFDLTELQLQNGQLTLDGTGTIAGSDVDARFDLDFSDL
AALGDRFAGVLDATAQIETEAGIRDITVTGTGQDLSVGQADLDAALRGDTEFTVNATQNA
DGIEISDLSVENDKLDATASGRIAEDGTDMRAQLQIPALAALGRGWEGSFTADAVLDQAA
NGLRNIRVDGLAQDLSLGQQNVDGALSGETRIEMRAQQQPDGALTLQSLDVSNEQLSANA
SGQLVEGAVNGEASAQIASLAALGQGWSGTLDATAEIDTDAAGTRRIEIDGTGENIKLGQ
EQADAALTGTTVIDIIAEQASDGAIRIERADVRNEQLTASAEGEIGEASTNATADISVSD
LASLGLGLQGALDVDASFADTGDGARRLTVTGEGQDLALGQQGNAGTLTGTTDINVSAVE
RDGSYTIEQARLSNDQTLINAEGMIGPSGTDANAEIEMTDLSALGLGMSGALSADASLQD
DGSGARSFTVDGIASDLALRQAGADRALSGETRFRATGTQQEGLITLESAQIDNPNLSGS
ASGTFGDGQTDLDAELQAGDLAFLGGGFGGAVDAEAQIQDTPQGRSYDVSGTAQDLSIGS
AQADAALAGETRFAAQAVQDGGRITISRLDAENPQLSLSGDGVIGGGETRFQAEAISRDL
SFLGPQFGGAVEANAQLVDQGGVQSFEITGTGTNIGVGVAQLDAALAGQTRFTASGSRDG
PVIALEAARASNGQFTATAEGVYGPDQTDIDIDLSVPSIGFAGPGYSGSVNATAQITDQN
GGRRIAAQATANGLGIGNERVDGLLSGQTRAELVAVQDESGITLERLDARNGQIQIIADG
NPAQGLNLDARLADLAPLVPGIDGPAQAVGTVQQVDGGTQLDIAVSGPGGTQAQLSGLLA
GEATDLRMSGISNAAAANGLLRTRSIEGPVDFDLRMQGAPGLESLTGQVNLNDGRLAEPA
IGLTVEDLNLTAQLAQGLINLDVDGALSAGGSVAVDGAVDLRSGAPVLDLTARLNQAVIR
DPALYELTADGTVSVTGVAADGPLVSGTINILEAEFRIPSTGLGGAQDIPDIQHVNDSWQ
AAATRAKAGLEPYGSLAAQQAELGGPAATPPPNPARFDLTINAPNQIFVRGRGVDAELGG
DMRLTGDARNPVPIGYLSLIRGRVDLLGKRFDLTEGLVELQGSLIPVIRLVATHQENDIT
IRIIIDGEVREPDITFESDPELPEEEVLSYLLFGQGLDEISPLQAAQLANAIAVLAGRGG
IGVVGNIRDATGLDDLDLTMDEDGSVAVRAGKYLSRNVYTDVELDDQGKTQINLNLDVTN
SVTARGSVDSEGESTLGLYYERDY
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcgtatcctcatctggctggcgttggtcgtcatgctgcccctcggcgctctg
gcgcaggatgatcctgacgaagacgcgacagtcgcggaaatctcggaacaggaatccgac
gatgaggggtttctcacccggtttctgcaaagccgcctgtcaaatgcaggccgctcggtc
gagatcgacggtttccgcggggcgctgtcatcgcgtgcaaccttcgacagcatcaccatc
gcagatgcggatggcgtctggctgacgctgcgcgacggcgcaatccagtggaaccgctct
gcacttctgcgaggccgggtcgaggtcggcgaactgaccgccgatctgatcgagatcccg
cgccctccggtgggtgaggaagaagaagaagcccgcgccgaggcccgcagcttctcgttg
cctgaactgcccgtgggcatcgccatcgaacagatcgaggccggccgcgtcgtcctgggc
agcccgctgctcggcgaggaagcagagatcacggtgagcgggtcgatgtcgctggcgggt
ggcgaaggcgtcgccgatgtcgtcatcagccgcattgacggcaagaagggcgagttcacc
tttgacggcagcttcgacaatgacagccgggtgctgaatatcgacctgtcgcttgacgag
gaccctaacgggatcttcagccggatcgccaatctcgaaggccgccccgccgtcaccgcg
caaatcaatggcgagggccctctgagcgattatcaggccgatatccagctcgcgaccgat
ggagtggaacggatcaccggcgatctgaccttcctcgccgaagagcgcggcgacgcgaac
ggcaacagcttcgagctgacgctgggtggcgacgtggcgacgcttctgccgcccgaaaac
agggagttcttcggggaaagcacccagatcgtcgccagcggctggcgcgccgatagcggg
cggctggaagtcgatgcgctggatttcgacacagacgcgctcaagatcagcggcagcctg
gcgacaaatgaccagaatgcgccgcagatgctggacctcaacgtcgatttcggtcaggag
gccggcgcaaagaccctgcccgtcacaatacccttcgtcgacccgccgatcactgtttta
tcgggcaatctggacgtggggtataacgccgccgagggttcggactgggcgttgagcggt
tggctgaccgagatcgatcgcgacacgacccggctctcgcgcctcgacctcgatggcgag
ggtcaggtgacactcgccgagggcgacacgctggagcagatcgacggcaccctgagcttc
gatgccagcgggatcgagctggtcagcgagcgcattcagaatgtcgtcggcgaccggatc
agcggcgtgacaggtttcgatttcacgccagggcaggtgctgaggctgagctcgatggag
atcagcggcaaggattacggcctggacggtgcgctgaccgtcgacgggctcgccagcggg
atcgtgctgtccacgtccggcatcgtggcacggcacgacaatctgtcgaacctgtccgaa
ctggccggccgctcgttgtcgggccgggccgaggctaatatgaccggctatttccaggcg
ctgaccggcgctttcgacattgacgggaccgtcaccggcaccgatctggctgtggatgat
ccgcgcctcgacaatcttctgtccggcgagtcgacgatcaccgtctcggccgggcgcacc
gaggatggcactgaactgcgggatctgtcggtgaatgcgcagcgcatctcgctggacgca
gcgggcacgatcaacgacgatatggtcgatctgaccgcgaatttcgatgtgccgacgctg
gccgatctcgatcccagcttcgaaggggcgctgagcgcgaatgcccggctgacgggaacc
acgggcgcccggcagctcgccgtgaccgggcaggcagcgggactgcgcaccgggattgac
gcgctggatggcgctttcgcgggcgaaaccgatctgaccgccgcgctgcgcgaaaacggc
gaaggcagcttcgatctgaccgagcttcagcttcagaatggccagctgacccttgacggc
accgggaccattgcgggcagcgatgtggatgcgcggttcgatctcgatttctccgatctc
gccgcgctgggcgaccgcttcgccggtgttcttgacgcgactgcgcaaatcgagacagag
gccgggatccgcgatatcaccgtgaccggcacgggtcaggatctctcggtcgggcaggcc
gatctggatgccgcgctgcgtggcgatacggaattcacggtaaacgcaacgcaaaacgcc
gatggcatcgagatttccgatctcagcgtcgagaacgataagcttgatgccactgcctcc
gggcggatcgccgaggatggcaccgacatgcgggcccagcttcagatccccgcgctggcg
gccttggggcgcggctgggagggatcgtttacggcagatgcggtgctggatcaggcggca
aacggtctgcggaatatccgtgtcgacgggctggcacaggatctgtcgctcggtcagcag
aatgtcgatggcgcgctgagcggggagacgcggatcgagatgcgtgcgcagcagcagccc
gacggcgcgctgacgctgcaatcgctggatgtgtcgaacgagcagctttctgcgaacgcg
tcaggccagcttgtcgagggtgcggtgaacggcgaagcttctgcccagattgccagcctc
gccgcgcttggtcagggctggtccgggacgctggacgcgaccgccgagatcgacactgac
gctgccgggacgcgaaggatcgagatcgacggcacgggcgagaatatcaagctgggtcag
gaacaggccgatgcggctctgaccggcacgaccgtgatcgacatcattgccgagcaagcc
agcgatggggccatacggatcgagcgggcggatgtccgcaacgaacagctcaccgcctcg
gctgagggcgagatcggcgaggccagcaccaacgcgactgcggatatctcagtcagcgat
ctcgcgtcgctcggtcttggcttgcagggcgctctcgatgtggatgcaagcttcgccgat
acaggcgacggtgcccggcgcctgaccgtgaccggggaggggcaggatcttgcgctcggt
cagcagggcaatgccggaacgctgaccgggacgaccgatatcaacgtctcggcggttgag
cgcgacggcagctatacgattgagcaggcacggctgagcaatgatcagaccctgatcaat
gccgaagggatgatcggcccatcgggcaccgatgccaatgccgagatcgagatgactgac
ctgtcggcgctcgggcttggcatgtcgggcgcgctgtcggccgatgccagccttcaagac
gatggcagtggcgcacgcagctttacggtcgacgggatcgcctcggatctggcgctccgc
caggcgggggcggatcgggcgctttcgggtgagacccggttccgggcgaccggcacgcag
caagaggggctgatcacgcttgaatcggcgcagatcgacaatccgaatctttcgggcagc
gcctcggggacatttggcgacggccagaccgatctcgacgctgaattgcaggcgggggat
ctggcatttctcggcggcggtttcggcggtgcggtcgatgccgaggcgcagattcaggat
acgccacaggggcgcagctatgatgtgagcgggacggcgcaggatctcagcatcggcagc
gcccaggccgatgcggcgctggctggcgagacgcgctttgccgcgcaggcggttcaggat
ggcggccggatcacgatcagccggttggatgccgaaaacccgcaactctccctgtcgggc
gacggcgtgattggcggcggcgagacccgttttcaggccgaggcgatcagccgggatctt
tctttccttggcccgcaattcggcggcgccgtcgaggcgaatgcgcagctcgtcgatcag
ggcggggtgcaaagcttcgagatcaccggaaccgggacgaatatcggcgttggggtggct
cagctagatgccgcgcttgccggccagacccggttcaccgcaagcggaagccgcgacggg
cctgtgatcgcgctggaggcggcgcgggccagcaatggccagttcaccgcaaccgcggaa
ggcgtctatggtccggatcagaccgatatcgatatcgatctttcggtcccaagcatcgga
tttgccggccccggatatagcggctcggtgaacgctacggcacagatcaccgatcagaat
ggcgggcgccggatcgcggcccaggccactgcaaacggactcggcatcgggaatgagcgg
gtggacggcctgctttccggccagacacgggccgagctggtggcggtgcaggatgaaagc
ggcatcacgcttgaacgcctggatgcgcggaacggccaaatccagatcattgccgatggc
aatcctgcgcagggcctgaacctggacgctcgtctggcggatctggcaccattggtgccg
gggatcgacggcccggcgcaagcagtgggcacggtgcagcaggtcgatggcggaacgcag
ctcgatattgcagtcagcggtccgggcggcacgcaggcgcagctttcggggctgcttgcc
ggtgaggcgaccgatctgcgcatgtcggggatcagcaacgccgcggcggcgaacgggctg
cttcggacgcgcagcatcgagggtccggtcgatttcgatcttcgcatgcagggtgcgccg
gggctcgagtcgctgaccgggcaggtcaatctgaatgatgggcggcttgccgaaccggcg
atcgggctgacggtggaagacctgaatctgaccgcgcagctggcgcaggggctcattaat
ctcgacgtggacggcgctttgagcgctggcgggtctgttgcggtggatggcgctgtcgat
ctgcgcagcggcgcgccggttctggacctgaccgcccggctgaatcaggccgtgatccga
gatcccgcgttgtacgaattgactgccgacggcaccgtctcggtgaccggcgtggcggcg
gatggcccgctggtgagcgggacgatcaacatcctcgaggccgagttccgcatcccctcg
accggtctgggcggcgcgcaggacattcccgacattcagcatgtgaatgacagctggcag
gccgccgccactcgcgccaaggccgggctggagccatatggcagcctggctgcgcaacag
gccgagctgggcggaccggcggcgacgccgccgccgaacccggcgcgcttcgatctgacc
atcaacgcgccgaaccagattttcgtgcgcggtcgcggcgtcgatgccgagcttggcggc
gatatgcgcctgaccggggacgcccgcaacccggttccgatcggatatctctccctgatc
cggggccgcgtcgatcttctgggcaagcggttcgatctgaccgagggactggtagagttg
cagggcagcctgatcccggtgatccggctggtagcgacgcatcaggaaaacgacatcacg
atccgcatcatcatcgacggcgaggtgcgcgaacccgacattaccttcgaatccgatccc
gagttgccggaggaagaggtcctgtcctatctgctctttgggcagggtctggacgagatc
agcccgcttcaggcggcgcagctggccaatgcgattgccgttctggccggtcggggcggg
atcggcgtggtcgggaatatccgcgacgcgaccgggctggacgaccttgatctgaccatg
gacgaggatggcagcgtcgccgtgcgcgcgggcaaatatctcagccgcaacgtctatacc
gatgtcgagctggacgatcagggcaagacccagatcaacctgaatctcgatgtgacgaac
tcggtcaccgcgcgcggctcggtcgatagtgagggcgaaagcacgctcggtctctattat
gagcgggattactga
DBGET
integrated database retrieval system
