Paracoccus sediminicola: PAF18_12890
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Entry
PAF18_12890 CDS
T09284
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim03030
DNA replication
pdim03430
Mismatch repair
pdim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAF18_12890 (dnaQ)
03430 Mismatch repair
PAF18_12890 (dnaQ)
03440 Homologous recombination
PAF18_12890 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdim03032
]
PAF18_12890 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pdim03400
]
PAF18_12890 (dnaQ)
Enzymes [BR:
pdim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAF18_12890 (dnaQ)
DNA replication proteins [BR:
pdim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAF18_12890 (dnaQ)
DNA repair and recombination proteins [BR:
pdim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAF18_12890 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WBU56361
LinkDB
All DBs
Position
2622541..2623263
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AA seq
240 aa
AA seq
DB search
MREIVMDTETTGLDPDKGDKLVEIGAVELINHLPTDNTFHEYINPQRDVPAEAVAVHGLT
QEFLSGKPLFEQVADKFLDFIGPDAKLVIHNASFDMKFLNAELAALGRPKLPWSRAIDTL
AIAREKFPGAQNSLDALCRRFNIDNSARSLHGALIDSQILAEVYLELIGGRQPDLVLSAP
SEQHDQNGPTERHQSRSDARQRPAALASRLSDAERAAHEEFVAKIGENALWHRYVSPSAG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtcatggacaccgagaccaccgggctcgacccggacaagggcgacaag
ctggttgagatcggtgcggtcgagctgatcaaccatctgcccaccgacaataccttccac
gaatatatcaacccgcagcgcgatgttccggccgaggcggtcgccgtccacggcctcacg
caggaatttctcagcggcaagccgctgtttgaacaggtcgccgacaaatttctcgacttt
atcggccctgacgcgaagctggtcatccacaacgccagtttcgacatgaaatttctcaat
gccgagctggctgctctgggtcgtccgaaactgccctggtcgcgcgcgatcgatacgctg
gccattgcgcgcgaaaaatttcccggtgctcagaactcgctcgatgcgctatgccgccgc
ttcaatatcgacaactcggcgcggagcttgcacggcgctctgatcgacagccagatcctg
gccgaggtctatctcgaactgatcggcggtcgccaacccgaccttgtgttaagcgcgccg
tctgagcagcatgatcaaaacggcccaaccgaacggcatcaatcgcgcagcgacgcgcgt
cagcgccccgcagcactcgcttcacggctgagcgatgcagaacgtgccgcccatgaggaa
ttcgtcgcgaagatcggtgaaaacgccttgtggcatcgctacgtcagcccctcagccggt
tga
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