Paracoccus sediminicola: PAF18_13185
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Entry
PAF18_13185 CDS
T09284
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdim03009
]
PAF18_13185 (rimO)
Enzymes [BR:
pdim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PAF18_13185 (rimO)
Ribosome biogenesis [BR:
pdim03009
]
Prokaryotic type
ribosomal protein modification factors
PAF18_13185 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBU56414
LinkDB
All DBs
Position
2677872..2679239
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AA seq
455 aa
AA seq
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MQANPPNLRPDLARATVPDAPRRDGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPD
YAGADAVIVNTCGFLDSAKAESLDAIGEALTENGRVIVTGCLGAEPDYITGAHPKVLAVT
GPHQYEQVLDAVHGAVPPAPDPFVDLLPASSVSLTPRHYSYLKISEGCNHKCKFCIIPDM
RGRLVSRPAHAVIREAEKLVAAGVKELLVISQDTSAYGVDLKHAEDRGHRAHITDLARDL
GSLGAWVRLHYVYPYPHVRNLIPLMAEGLVLPYLDIPFQHAHPDTLKRMARPAAAAKTLD
EIAAWRDICPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGAFQYENVAGARAND
LLDHVPEDVKQDRFERFMQKAQAISGSKLASKVGTRIEVIVDEVDDEAATCRTKADAPEI
DGNLFIDEGFERLKPGDIVSVTVDEAGEYDLWGRL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgaacccgcccaatctgcgccccgatctcgcccgcgccacggttcccgacgcg
ccgcgccgcgacgggcagccgaccatcgggatggtcagcctcggctgtcccaaggcgctc
gtcgatagcgaacgcatcctgacccggctgcgggccgagggctatgcgatcagcccggat
tatgcgggcgcggatgcggtgatcgtgaacacctgcggttttctggacagcgccaaggcg
gaaagcctcgatgcgatcggcgaggcgctgaccgagaacggtcgggtcatcgtcaccggc
tgcctgggcgccgagccggactatatcaccggcgcgcaccccaaggttctggccgtcacc
gggccgcatcaatatgaacaggtgctggacgcggtgcatggcgcggttccgcccgcgccc
gatcctttcgtggatctgctgcccgcaagcagcgtcagcctgacaccccgccattacagc
tatctgaagatttccgagggctgtaaccacaaatgcaaattctgcatcatccccgatatg
cgcggccgtctggtcagccgcccggcccatgcggttatccgggaagccgaaaagctggtc
gcggcgggggtgaaggaactgctggtgatctcgcaggacacctctgcttatggtgtggac
cttaagcacgccgaggatcgcggccaccgcgcccatatcaccgatctcgcccgcgatctg
ggttcgcttggggcatgggtgcggttgcattacgtctatccctatccgcatgtccgcaat
ctgatcccgcttatggcggaagggctggtgctgccctatctggatattccgttccagcac
gcccatcccgatacgctcaaacgcatggcccgccccgcagcggcggcgaaaacgctggac
gagatcgccgcatggcgcgacatctgcccggacattaccctgcgttccacctttatcgtc
ggctatcccggcgagaccgaggccgaattccagacgcttctggactggctggatgaagcg
caactggaccgggtcggcgcgttccaatacgaaaacgtcgccggtgcgcgggccaatgac
ctgctcgaccacgtgccggaggatgtgaagcaggaccgtttcgaacgcttcatgcagaag
gcgcaggcgatctcggggtccaagctggccagcaaggtcggcacccggattgaggtgatc
gtggacgaggtggacgacgaagccgcgacctgccgcaccaaagccgacgcgccggaaatc
gacggcaacctgttcatcgacgaggggttcgagcgcctcaaacccggcgatatcgtcagc
gtcacagtcgatgaggccggcgaatatgacctctggggccggctgtga
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