Paracoccus sediminicola: PAF18_13350
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Entry
PAF18_13350 CDS
T09284
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdim
Paracoccus sediminicola
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdim03016
]
PAF18_13350
Enzymes [BR:
pdim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PAF18_13350
Transfer RNA biogenesis [BR:
pdim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PAF18_13350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WBU56446
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All DBs
Position
2713051..2713665
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AA seq
204 aa
AA seq
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MANHLYQNDLPDDLDLGPVVAIDTETMGLDPRRDRLCLVQMSSGDGDAHMVQIAQGQTDA
PNLSRMLADPQVLKLFHFGRFDIAALQNALGVVTAPVWCTKIASKLIRTYTDRHGLKYLL
QSQLDVDISKQQQTSDWGATELSEAQLEYAASDVLHLHQLKDRLEALLIREDRLALAQSC
FDFLPTRAQLDLLGWGDDNDIFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcatctttatcagaacgaccttcccgacgatctggacctcggcccggtcgtg
gccatcgacaccgagacgatggggctcgacccccggcgcgaccggctctgtctggttcag
atgtcgtccggcgacggtgatgcgcatatggtccagatcgcgcaggggcagacagacgcc
ccaaacctgtcgcggatgctggccgatccgcaggtgttgaagctgttccatttcggccgt
ttcgacatcgcggcgctgcaaaacgcgcttggcgtggtgactgccccggtctggtgcacc
aagatcgcgtctaagctgatccgcacctataccgaccgccacgggctgaaatacctgctt
cagtcgcaactcgacgtggatatctcgaagcagcagcagacctcggattggggcgcgacc
gagctgagcgaggcgcagctggaatatgccgcgtcggacgtgctgcatctgcatcagctc
aaggacaggctagaggcgcttctgattcgtgaggatcggttggctctcgcgcaatcatgc
ttcgatttcctgcccacccgcgcgcagttggatctgctgggatggggcgatgacaacgac
atttttcaccactga
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