Paracoccus sediminicola: PAF18_15400
Help
Entry
PAF18_15400 CDS
T09284
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pdim
Paracoccus sediminicola
Pathway
pdim00330
Arginine and proline metabolism
pdim00480
Glutathione metabolism
pdim01100
Metabolic pathways
pdim01110
Biosynthesis of secondary metabolites
pdim04148
Efferocytosis
Module
pdim_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pdim00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PAF18_15400
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PAF18_15400
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PAF18_15400
Enzymes [BR:
pdim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PAF18_15400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WBU56833
LinkDB
All DBs
Position
3137348..3138490
Genome browser
AA seq
380 aa
AA seq
DB search
MTKADTVWDNPAEIIRNTQPENPVMAFAPSVLQDTARRFLDGFPGLVTYAVKSNPEESVI
ENLVQAGISGFDVASPAEIDLIGRLAPDAARHYHNPVRARAEIAHAVQAGVRAWSVDSSS
ELDKLIEMVPSENCEISPRFKLPVAGAIYDFGSKFGASPEHAAELLARVAKAGFIPSLTF
HPGTQCTDPGAWEHYIRTARDICEMAGVTARRLNVGGGFPSHRVNGVEPALEDIFTLISD
TTAEAFGADAPHLVCEPGRGICADAFSLITRVKAVRDGGHVFLNDGVYGGLAELPIVGNI
DRIQLLAADGTPRGGDETGRVIFGPTCDSVDRLPGELTLPGDVAEGDYLIFHGAGAYSVV
TNTRFNGFGEMARATVRNLG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagccgataccgtctgggacaaccccgccgaaatcatccgcaacacgcagccc
gaaaacccggtcatggccttcgcgccaagcgtgttgcaggacacggcgcggcggtttctc
gacggcttccccgggctggtcacctatgcggtgaaatccaatcccgaagagagcgtcatc
gaaaatctcgtgcaggccgggatcagcggcttcgacgtggcctcaccggctgaaatcgac
ctgatcggccgcctcgcccccgatgcggcgcggcattaccacaacccggtccgcgcccgg
gccgagattgcccatgcagttcaggccggcgtcagggcgtggtcggtggacagcagttcc
gaactcgacaagctgatcgagatggtgccctccgagaattgcgagatctcgccgcgcttc
aagctgccggtggcgggcgcgatctatgatttcggatcgaaattcggcgcctcgcccgaa
cacgcagccgagcttctggcgcgggtggcgaaggcaggtttcatcccctcgctcaccttc
catcccggcacgcaatgcaccgatcccggcgcgtgggaacattacatccgcaccgcccgc
gacatatgcgagatggccggggtgacggcgcggcggctgaatgtcggaggcggcttcccc
tcgcatcgggtcaacggggtcgagcccgcgctcgaagacatcttcaccctcatctccgac
accaccgccgaggcgttcggcgccgatgcgccccatctcgtctgcgaaccggggcgcggc
atctgcgccgatgcgttctcgctgattacccgcgtcaaggcggtccgcgatggcgggcat
gtgttcctgaatgacggggtctatggcgggctggccgaattgcccatcgtcggcaatatc
gaccggatccagcttctcgccgccgacggcaccccgcgcggcggcgatgagaccgggcgg
gtcattttcggcccgacctgcgactccgtcgaccggcttcccggcgagctgacccttccc
ggcgacgtggccgagggcgactatctgattttccacggcgccggcgcctattcggttgtg
accaatacccgcttcaacggcttcggagagatggcccgcgccacggtccgcaacctcggt
tga
DBGET
integrated database retrieval system