Paracoccus sediminicola: PAF18_17265
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Entry
PAF18_17265 CDS
T09284
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
pdim
Paracoccus sediminicola
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WBU58760
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Position
p4:22330..24102
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AA seq
590 aa
AA seq
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MIWVGRLFRFLAGMAAMAIAVPWLLFQLAVLLLLASGAAIVTFMLVRGLILGEAVVTDPT
SVVGRLGFLVVQLAFWALAVRFWAYLHGFDHLFARRGNSHGSARFSSKAERAAFRQGDGL
LIGRDPETGRLLRYDGPAHLLTLAPTRAGKGVGTIIPNLLTANRPVLVIDPKGENARIAA
KARERFGPVHVLDPFGVTGLPSAACNPMAGLDPGDPDLGDEAATLAEALVMDPPGQVHDA
HWNEEAKSLLAGLILFCACHEPPERRTLASVRDYLSLPPGKWAALLELMQESDAAGGLIA
RAANRFAGKAEREAASVMSNAQRHTRFLDSPRIVAALSRSDVDFADLRRGVTSIFLVLPP
NRLDAYSRWLRLMLSQALQDIARAAERPGEAHSAADTPAGALNGSESATEALEVPEAAQE
AGDPPERRRDAARAVPAPALFLLDEFAALGRLEAVERGMGLMAGYGIQLWPILQDLSQLR
DLYGARAGTFLANAAVQQVFGVNDLDTAKWLSESIGKETAYGQSESHQPGEPASLTTAPL
ARDLLTPDEIMQMPAHLQLLRVQGQPVMLAEKLRYYADSEFENLFTPQPA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtcggtcggctgttcaggtttctcgccgggatggccgcgatggcgatcgcg
gtgccctggctgctcttccagctggcggtcctgctgctcctcgcctcgggcgcggcgatc
gtcaccttcatgctggtccgggggctgatcctcggggaagcggtggtgaccgatccgacc
tccgtggtgggtcggctgggattcctcgtcgtgcagctggccttctgggcgctggcggtg
cgtttctgggcctatctccacggcttcgatcacctcttcgcccggcgcggcaacagccac
ggctccgcccgcttcagctcgaaggcggaacgcgcggccttccggcagggtgacgggctg
ctgatcggccgcgatccggagaccggccggctgttgcgctatgacggtcccgcccatctg
ctgaccctggcaccgacccgtgcagggaaaggggtgggcaccatcattcccaacctgctg
accgcgaaccgcccggtgctggtgatcgacccaaagggcgagaatgcccgcatcgcggca
aaggcgcgcgaacgcttcggcccggtccatgtcctcgatcccttcggcgtcaccggcctg
ccatccgccgcctgcaacccgatggcggggctcgatcccggtgatccggatctcggcgac
gaggccgcgaccttggccgaggcgctggtcatggacccgcccggacaggtccatgacgca
cattggaacgaggaggccaaatcgcttctcgccgggctgatcctgttctgtgcctgccac
gagcccccggagcgccggacgctggcctccgtgcgggactacctgtcgctgccgcccggc
aaatgggcggcgctgctggagctgatgcaggagagcgacgcggccggcgggctgatcgcc
cgcgccgccaaccgctttgccggcaaggccgagcgcgaggccgcctcggtcatgtcgaac
gcgcagcgccatacccgcttcctcgacagcccgcgcatcgtcgcggccctgtcccgctcg
gacgtggattttgccgatctgcgccggggcgtgacctcgatctttctcgtcctgccgccg
aaccggctggatgcctacagccgctggctgcggctgatgctgtcccaggccctccaggac
atcgcccgggccgcggaacgccccggagaggcccacagcgccgctgacacgcccgcaggc
gccctgaacggctccgagagcgccacagaggcgctggaggtccccgaggcggctcaggag
gccggagatccgccggaacggcgcagggacgccgcgcgggcggtcccggcccctgccctc
ttcctgctggacgagttcgccgcgcttggccggctggaggcggtggagcgcggcatgggg
ctgatggcggggtatggcatccagctctggcccattcttcaggacctgagccagctccgg
gatctctacggcgcccgcgccggcaccttcctcgccaatgcggccgtgcagcaggtcttc
ggggtcaacgatctcgacaccgcgaaatggctgagcgagagcatcggcaaggaaaccgcc
tatgggcagtcggaaagccaccagccgggcgaaccggcctcgctgaccacggcacccctc
gcccgcgacctgctgacgcccgacgagatcatgcagatgccggcccatctccagctgctc
cgcgtgcagggccagcccgtgatgttggccgaaaagctgcgctactacgctgattccgag
tttgaaaatctcttcacgccgcaacccgcctga
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