Paraburkholderia dioscoreae: PDMSB3_0052
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Entry
PDMSB3_0052 CDS
T08115
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_0052
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDMSB3_0052
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Defensin_4
HTH_11
HTH_23
Motif
Other DBs
NCBI-ProteinID:
VVD26514
UniProt:
A0A5Q4ZC34
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Position
I:49849..50907
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AA seq
352 aa
AA seq
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MTTDTSGDSLPASTLTPQPSFCVQTRVAHDADEQARNLHGWSQTYDQLTAGCFVGGLTEL
CLDHTQVFVETTSHTLRQTCEVQKDAYWFGIPTCPAGSGRIDAQVIAGDALAFRPGGIEF
ELLTSAGYEIFGVVVKGEVLRRYAAQVERVGLADHVPNTPVVPIGMARKEQLCATLRQLL
DDGAARGAPLSSVGRNNLQAAVLASLFDVGALPASEPVAMPARPRSQSIVSEARDYVLLN
RDRAVSVPELCGQLHVSRRTLQYCFQDVLGMAPATYLRAIRLNGARRDLSNAARESCSVQ
DVATAWGFWHLSQFATDYRKLFGMRPSETLKAAADARVERAGAFNAVALAHH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgacacttccggcgacagcttgccagcctcgacgctcacaccacagccgagc
ttctgcgtgcagacccgcgtcgcccatgacgccgatgagcaggcgcgcaaccttcacggc
tggagccagacctacgaccagttgacagccgggtgctttgtcggcggcctgacggaattg
tgtctcgaccacacgcaggtgtttgtcgaaacgaccagccatacgctgcggcaaacctgc
gaagtgcagaaggacgcctactggtttggcatcccgacttgccccgcggggtcggggcgt
atcgacgcgcaggtgatcgccggcgacgcgctcgcgtttcgtccgggcgggatcgaattc
gaactgctaacctcggcgggttacgagattttcggcgtggtggttaaaggcgaagtgctg
cgccgttacgcggcgcaagtggagcgcgtcggtctggccgaccatgtgccgaacacgccg
gtcgtgccgatcggcatggcgcgcaaggagcagttgtgcgccacgctgcgccagttgctc
gacgacggcgcggcgcgcggcgcgccgctatcgtcggttggtcgcaacaatctgcaggcc
gcagtgctggcttcgctattcgacgtgggcgcgttgcccgcctcggagccggttgcgatg
ccggcgcgtccgcgcagtcagtcgatcgtatcggaggcgcgcgactatgtgctgctcaat
cgcgaccgggcggtgagcgtgcccgagttgtgtgggcaactgcatgtgagccggcgcacg
ctgcaatactgctttcaggacgtgctcggcatggcgcccgccacgtatctgcgcgcgatt
cgcctgaatggcgcgcggcgcgatctgtcgaatgcagcgcgcgaatcatgctcggtgcag
gacgtcgcaacggcgtggggcttctggcacctgagccagttcgcgaccgattaccggaag
ctcttcggcatgcggccttcggagacgttgaaggcggcggccgacgctcgcgttgaaagg
gccggcgcgttcaacgcggttgctttggcgcaccactga
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