Paraburkholderia dioscoreae: PDMSB3_0100
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Entry
PDMSB3_0100 CDS
T08115
Name
(GenBank) Phosphoglycerate dehydrogenase-like oxidoreductase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00260
Glycine, serine and threonine metabolism
pdio00270
Cysteine and methionine metabolism
pdio00680
Methane metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
pdio01230
Biosynthesis of amino acids
Module
pdio_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
PDMSB3_0100
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PDMSB3_0100
00270 Cysteine and methionine metabolism
PDMSB3_0100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdio04147
]
PDMSB3_0100
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
PDMSB3_0100
1.1.1.399 2-oxoglutarate reductase
PDMSB3_0100
Exosome [BR:
pdio04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PDMSB3_0100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
KARI_N
AdoHcyase_NAD
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
VVD26562
UniProt:
A0A5Q4Z9Q7
LinkDB
All DBs
Position
I:complement(89117..90208)
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AA seq
363 aa
AA seq
DB search
MTWVTWWDSQHNIPFRTTKVRRKTHTMKIAILDDYQDAVRKLDCFQLLADHEVKVFNNTV
RGLGQLASRLSEVDALVLIRERTRITSQLLDKLPRLRMISQTGKVSSHIDLAACTERGIA
VLEGTGSPFAPAELTWALIMAAQRRIPQYVANLKQGAWQQSGLKTSALPPNFGLGQVLRG
QTLGIWGYGKIGQLLAGYGKAFGMNVLIWGREHSREAARADGYGVAESREALFEQSDVLS
LHLRLHDDTRGIVKQEDLMRMKPTALLVNTSRAELLDENALVNALSHNRPGMVAIDVYES
EPILQGYSLLRMENVICTPHIGYVERESYEQYFTAAFNNILAFDAGDSASVANPEALQGG
RRR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgacctgggtcacatggtgggacagtcagcataacattccgttccgcaccaccaaggtg
cggcgcaagacacataccatgaagattgccatcctcgacgattaccaggacgccgttcgc
aagctcgactgctttcaattgctggccgaccatgaggtcaaggttttcaacaacaccgtc
cgcggtctcggccaactggcaagccgcctttccgaagtcgatgctctcgtcctgattcgc
gaacgcacgcgcatcacctcacaactgctcgacaaattgccgcgtttgcgcatgatcagc
caaaccggcaaggtctcgagccacatcgatctggcggcttgtaccgagcgcggcattgcc
gtgctggaaggcaccggttcaccgttcgcgcccgccgagttgacgtgggctctcatcatg
gcggcccaacggcggattccgcaatacgtagcaaaccttaagcagggagcctggcagcag
tctggcctgaagacgtccgcgctgccgccgaatttcggcttgggccaggtgttgcgaggg
cagacgctcgggatttggggttacggcaagatcggtcaactgctcgccggatacggcaag
gcattcggcatgaacgtgctgatctggggtcgcgagcattcgcgcgaagctgctcgcgcc
gacggttacggcgtggcggagagccgcgaggcattgttcgagcagagcgacgtgctgtcg
ctacatttgcgcctgcacgacgacacgcgcggcatcgtcaaacaggaagacctgatgcgg
atgaagcccaccgcgctgctcgtgaatacgagccgggccgaattgctcgacgagaacgcg
ctggtgaatgcactgtcgcacaatcgcccggggatggtcgccatcgatgtctatgaaagc
gagccgattctgcagggctacagcctgctgcgtatggaaaacgtgatctgcacgccgcat
atcggctatgtggaacgggagagctacgagcagtacttcaccgccgcgttcaataacatt
ctggctttcgatgctggcgattcggccagcgtggctaatccggaagcgttgcagggcggc
cgccggcgctaa
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