Paraburkholderia dioscoreae: PDMSB3_0103
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Entry
PDMSB3_0103 CDS
T08115
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdio03032
]
PDMSB3_0103
Enzymes [BR:
pdio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PDMSB3_0103
DNA replication proteins [BR:
pdio03032
]
Prokaryotic type
DNA Topoisomerases
PDMSB3_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
HypA
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
VVD26565
UniProt:
A0A5Q4Z5K8
LinkDB
All DBs
Position
I:complement(93974..96640)
Genome browser
AA seq
888 aa
AA seq
DB search
MSKALIIAEKPSVANDIARALGGFTKHDEYYESDEYVLSSAVGHLLEIAAPEDYEVKRGK
WSFANLPVIPPHFDLNPIAKSESRLKVLTKLLKRKDVDRLINACDAGREGELIFRLIAQH
AKAKQPVQRLWLQSMTAGAIRDGFARLRSDEEMQPLADAARCRSEADWLVGINGTRAMTA
FNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRRFVPRDYWEVKAEFVCSAGFYEGRWFDP
KFKRDEFDPEKRDSRLWSLPAAETIVAACRGQIGTVTEESKPSTQLSPALFDLTSLQREA
NGRFGFSAKNTLGLAQALYEKHKVLTYPRTDARALPEDYMDTVKETLGMLKESNNYLPFA
KQVLDKGWVKPNKRIFDNSKISDHFAIIPTLQAPKNLSEPEQKLYDLVVKRFLSVFFPAA
EFKVTTRITEVVGHHFKTEGKVLVEPGWLQVYGREISGEDANLVPVQKDEKVKTDKIAAQ
QLVTKPPARYNEATLLSAMEGAGKLVEDDELREAMAAKGLGTPATRAAIIEGLLGEKYLI
REGRDLIPTAKAFQLMTLLRGLGVKELTAPELTGEWEYKLSQMERGNLPRDAFMQEIARM
TQTIVKRAKEYDSDTIPGDYATLETPCPNCGGQVKENYRRFACSKCEFSISKIPGGRQFE
IPEVEELLRNKTIGPLSGFRSKMGRPFSAILKLSFDDEIKNYKLEFDFGQDAGGEDGEPP
DFSDQQPVGACPKCKGRVFEHGMSYVCENSVANPKTCDFRSGKVILQQEIAREQMAKLLE
EGRTDLLTNFKSSRTGRNFKAFLVKQNDGKIGFEFEKKEPSAKTVAKTAAAKAAAESADS
ESEEGGAPVAVKAAPAAKKVAAKKAPATKTAAAKKAPARKTAARKTGS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcactgatcatcgccgaaaagccttccgtcgcgaacgacatcgcgcgcgct
ttgggcggctttaccaagcatgacgaatactacgaaagcgacgagtacgtcctttcctcg
gcagtcggccacctgctggaaattgccgcgcccgaagactacgaagtcaaacgcggcaag
tggagtttcgccaacctgcccgtcatcccgccgcacttcgatctcaacccgatcgccaag
agcgagtcgcgcctgaaggtgctgaccaagttgctcaagcgcaaggacgtcgaccgtctg
atcaacgcatgcgacgcggggcgcgagggcgagctgatattccgcctgatcgcgcagcac
gcgaaagccaagcagccggtgcagcgcctgtggctgcaatccatgacggcgggcgcgatc
cgcgacggcttcgcccgtctgcgcagcgacgaagagatgcagccgctcgccgatgctgcg
cgctgtcgctcggaggcggactggctggtcggcatcaacggcacgcgggccatgaccgcg
ttcaacagcaagggcggcggcttcttcctgaccacggtcgggcgggtgcaaacgccaacg
ctgtcgatcgtggtcgagcgcgaagagaagattcgccgcttcgtgccgcgcgactattgg
gaagtgaaggcggaattcgtctgctcggccggcttctacgaaggccgctggttcgatccg
aaattcaagcgcgacgagttcgatccggaaaaacgtgattcgcgcctgtggtcgctgccc
gcggccgaaacgatcgtcgccgcgtgccgtggccagatcggcacggtgaccgaggaatcg
aagccgtccacgcaactgtcgccggcgctcttcgacctgaccagcttgcagcgggaggcc
aacggccgcttcggcttctcggcgaagaacaccttgggcctcgcccaggcgctgtacgaa
aagcacaaggtgctgacctatccccgtaccgacgcgcgcgcgctgccggaagactatatg
gatacggtcaaagagacgctcggcatgctcaaggagagcaacaactatctgccgttcgcc
aagcaggtgctcgacaagggctgggtgaagccgaacaagcgcatcttcgacaactcgaag
atcagcgaccacttcgccatcatcccgacactgcaagcgccgaagaacctgtccgaaccg
gaacagaagctctacgacctcgtcgtgaagcgattcctgtcggtgttcttccccgccgcc
gaattcaaggtgacgacgcggatcacggaagtggtcggccatcacttcaagaccgaaggc
aaggtactggtcgagccgggctggttgcaggtctacggccgcgagatcagcggcgaagac
gcgaacctcgtgccggtgcagaaggacgagaaggtcaagacggacaagatcgccgcccag
caactggtgacgaagccgcctgcacgctacaacgaagccaccttgctgtcggccatggaa
ggcgcgggcaaactcgtcgaagacgacgagttgcgcgaagcgatggcggccaaggggctc
ggcacgccggccacgcgagcggcgatcatcgaaggtttgctgggtgaaaagtatctgatt
cgcgaaggccgcgatctgattccgaccgccaaggctttccagctcatgacgctgttgcgc
ggtctcggcgtgaaggaactgacggcgccggaattgaccggggagtgggaatacaagctc
tcgcaaatggaacgcggcaacctgccgcgcgacgcgttcatgcaggaaatcgcccgcatg
acgcagaccatcgtgaagcgcgcgaaagagtacgactccgacacgatcccgggcgactac
gcgaccctggaaacgccgtgtccgaattgcggcggccaggtgaaggagaactaccggcgc
tttgcctgctcgaagtgcgagttctcgatttcgaagattccgggcggacgtcagttcgaa
attccggaagtcgaagagttgctgcggaataagacgatcgggccgctgtcgggtttccgc
agcaagatgggccggccgttctcggcgatcctgaagctctcgttcgatgatgagatcaag
aactacaagcttgaattcgacttcggccaggatgccggcggcgaagacggcgaaccgcct
gacttctccgatcagcaaccggtcggcgcgtgcccgaagtgcaagggccgggtgttcgag
cacggcatgagctacgtctgcgagaactcggtcgccaatccgaaaacttgcgacttccgc
tccggcaaggtgatcctgcagcaggaaatcgcccgcgagcagatggccaagctgctcgaa
gaaggccgcacggacctgctgacgaacttcaagtcgtcgcgtaccggccggaatttcaag
gcattcctcgtcaagcagaacgacggcaagatcggcttcgagttcgagaagaaggagccg
tcggcgaagactgttgcgaagacggcggcggccaaggcagcggcggaatcagcagattcg
gagtccgaggaaggcggagcgccggtggcggtgaaggccgcgccggcagcaaagaaggtt
gcggcgaaaaaagcgcccgcaaccaaaacggcggcagccaagaaagcgccagccaggaaa
acagcggcgcgtaaaaccggctcgtaa
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