Paraburkholderia dioscoreae: PDMSB3_0145
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Entry
PDMSB3_0145 CDS
T08115
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase
KO
K03733
integrase/recombinase XerC
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdio03036
]
PDMSB3_0145 (xerC)
Chromosome and associated proteins [BR:
pdio03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PDMSB3_0145 (xerC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
E02H4_C
DUF3435
Motif
Other DBs
NCBI-ProteinID:
VVD26607
UniProt:
A0A5Q4Z8I8
LinkDB
All DBs
Position
I:complement(141728..142651)
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AA seq
307 aa
AA seq
DB search
MTAADPIAAYLSNLEHERRLSAHTLRGYTHELEELKLLAKGRPLESLTAVDIRGAVSRAH
AGGLTARSISHRLSAWRAFYRWLAGRVDLPANPVATVRAPKQAKTLPKALSVDDATRLME
SPPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYRSAGWLKLDSAEVEVLGK
GNRRRVVPVGSKALEALGAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVA
GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAH
PRAKKRD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgccgacccgatcgccgcctatctgtcgaatctcgaacacgagcggcggctc
tcggcgcatacgctgcgcggctacacacacgaactggaagaactcaagctgctggccaag
ggccggccgctcgaaagcctcaccgccgtggacattcgcggcgccgtttcgcgggcgcac
gcaggcggcctgacggcgcgctcgatcagccaccgcctctcggcatggcgcgcgttttac
cgctggctcgccggccgcgtcgatctgccggccaatccggtcgcgaccgtgcgcgcgcca
aagcaggccaaaacgctgcccaaagcactttccgtcgacgacgccacgcgtctgatggag
agtcctcccgctgcatcgcccgaaggtttgcgcgatcacgccatgctcgaactgttctac
tcgtcgggcttgcgtctcgcggaactggtcggcctcgacgcccgtttcgccgatgccgac
ggctaccgctccgccggctggctcaagctcgactcggccgaagtcgaagtgctcggcaaa
ggcaaccggcgccgcgtcgtgccggtcggcagcaaggcgctggaagccttgggcgcctgg
ctcgccgtgcgcgaccagatggtgaagcacgatccgcatccgctgttcctgtcggcgcgc
ggcaatcggctgtcaccgaacgtagtgcgtgagcgcgtaaagcgcgcggcgctggtcgcc
ggcattcccgccaacgtgcatccgcacgtgctgcggcattcgttcgccacgcacgtgctg
cagtcgagcggcgatctgcgtgcggtgcaggaactgctcggccacgccagcatcaccgcc
acgcaggtctacaccgcgctcgatttccagcatctcgcgcacgtctacgatcaggcgcat
ccacgcgccaaaaaacgcgactga
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