Paraburkholderia dioscoreae: PDMSB3_0159.1
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Entry
PDMSB3_0159.1 CDS
T08115
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, FeS subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00020
Citrate cycle (TCA cycle)
pdio00190
Oxidative phosphorylation
pdio00650
Butanoate metabolism
pdio00720
Other carbon fixation pathways
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
Module
pdio_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdio_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdio_M00149
Succinate dehydrogenase, prokaryotes
pdio_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PDMSB3_0159.1 (sdhB)
00650 Butanoate metabolism
PDMSB3_0159.1 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PDMSB3_0159.1 (sdhB)
00720 Other carbon fixation pathways
PDMSB3_0159.1 (sdhB)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PDMSB3_0159.1 (sdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_7
Fer4_9
Fer4_16
Fer4_18
Fer4_4
Fer2
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
VVD31462
UniProt:
A0A5Q4YX02
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All DBs
Position
II:164907..165611
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AA seq
234 aa
AA seq
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MAKRTFEIYRYDPDKDAAPRMQTYEIEIDSHERMLLDALLKLKAVDETLSFRRSCREGVC
GSDAMNINGKNGLACLQNMNDLPQKIVLRPLPGLPVVRDLICDFTQFFNQYHSIKPYLIN
DTPPPEKERLQSPEERDELDGLYECILCASCSTSCPSFWWNPDKFVGPAGLLQAYRFIAD
SRDEATGERLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTKAIGKIKELMVRRAV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgtacatttgaaatttaccgctacgacccggacaaggacgcagcgccgcgc
atgcaaacgtacgagatcgaaatcgactcgcacgaacgcatgctgctcgacgcgctgctg
aagttgaaggcagttgacgagactctttcgttccgccgttcgtgccgtgaaggcgtgtgc
ggttcggacgccatgaacatcaacggcaagaatggtctggcctgcctgcagaacatgaat
gatctgccgcagaagatcgtgctgcgtccgctgccgggcctgcctgtggtgcgcgacctg
atctgcgacttcacgcagttcttcaaccagtatcattcgatcaagccgtatctgatcaac
gacacgccgccgccggaaaaggagcgtctgcagtcgccggaagaacgcgacgagctcgac
ggcctgtatgaatgtattctgtgcgctagctgctcgacttcgtgcccgagcttctggtgg
aatccagacaagttcgttggcccggccggcctgttgcaagcctaccgtttcatcgcggat
agccgcgacgaagcaacgggcgaacgcctcgacaacctggaagatccgtaccgtctgttc
cgttgccataccattatgaattgcgtcgacgtttgcccgaagggcctgaacccgaccaag
gcgattggcaagatcaaggaattgatggttcgccgcgctgtctag
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