Paraburkholderia dioscoreae: PDMSB3_0248.2
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Entry
PDMSB3_0248.2 CDS
T08115
Name
(GenBank) AraC-type DNA-binding protein
KO
K07506
AraC family transcriptional regulator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_0248.2
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDMSB3_0248.2
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
VVD31084
UniProt:
A0A5Q4Z2S6
LinkDB
All DBs
Position
pI:complement(181216..181992)
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AA seq
258 aa
AA seq
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MNVAFADGGLNSVQGLRLVIPTGSTVARAAGSDGPGMSHSILISAPFVAIIPAGAQLAID
ADNDPTGWVIALKPGVLGQVSQEAFDAVPKWSRSWDPFLREAADTLAALHHANLIDAACA
DAFADVISVHIALRYGHCAGAAEPETPLTRPMLTRIEAFVHEHIAETILVEQLAVLVNMG
ASTFARAFKTATGKPPHRYVTLERVRFAKTMLCETTIPLVDVGARAGFQTQQHFTEVFHR
YTGVTPRAYRLAHRNVGS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgctttcgccgatggcggcctgaattcggtgcagggacttcgcctcgttata
ccgacaggtagcactgttgcgcgggctgcgggcagcgacggtcccggaatgagtcactcc
atcctgatcagtgcaccatttgtcgcaatcattccggcgggggcgcagttggccatagac
gctgacaacgatcccacgggatgggttatcgcactcaaaccgggcgtacttgggcaagtc
tcgcaagaagcgtttgacgcggtcccgaaatggtccaggtcttgggatccgttcctgcgc
gaggccgcggacacattggctgctttgcatcatgcgaatctcatcgacgctgcctgcgcc
gacgcttttgcagatgtcatctcggtgcacatcgctctgcgctacggacactgtgctggt
gcggccgagccggagacgcctcttacgcgtccaatgctgactcgcattgaagccttcgtt
cacgagcacatagccgaaaccattttggtcgagcaactcgcagtgctggtgaacatgggt
gcatcaacctttgcgcgtgctttcaaaacggcaacaggtaaaccgccccatcgttacgtg
acactcgaacgggtgagatttgccaagacaatgttgtgcgagacaaccattcccctggtt
gacgttggcgcgcgcgcggggttccagactcagcagcatttcaccgaagtgtttcatcga
tacaccggtgtgacgccgcgcgcataccgacttgcccaccggaacgtcggtagctga
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