Paraburkholderia dioscoreae: PDMSB3_0344
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Entry
PDMSB3_0344 CDS
T08115
Symbol
dctD
Name
(GenBank) C4-dicarboxylate transport transcriptional regulatory protein DctD
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_0344 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pdio02022
]
PDMSB3_0344 (dctD)
Two-component system [BR:
pdio02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
PDMSB3_0344 (dctD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_2
AAA_16
FleQ
OKR_DC_1_N
TPP_enzyme_C
AAA
Motif
Other DBs
NCBI-ProteinID:
VVD26806
UniProt:
A0A5Q4ZCL7
LinkDB
All DBs
Position
I:344959..346311
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AA seq
450 aa
AA seq
DB search
MLNHGLQVLYIEDDELVRRASVQSLQLAGFDVIGHASVESAAKTIGADFSGVIVSDIRLP
GASGLDLLAQCHERAPDVPVILVTGHGDISMAVQAMRDGAYDFIEKPFASERLIETVRRA
LERRKLVLENLALRRELAEQNSVAPRIIGRSPAIEQVRRLIANIAPTDASVLINGDTGAG
KELIARSLHELSPRRDKPFIAVNCGALPEPMFESEMFGYEPGAFTGAAKRRIGKLEHASG
GTLFLDEIESMPLALQVKLLRVLQDGVLERLGSNQPIRVNCRVVAAAKGDMAEHVADGSF
RRDLLYRLNVVTIALPPLGERREDIVPLFEHFLLDAAVRYQRPAPILTDRQRAGLMQRDW
PGNVRELRNAADRFVLGVADDPVMSFGDDGAAAQPLKERVEQFERAVIAEALEQTGGVVA
VAADKLQLGKATLYEKIKRYGLAAKGEGER
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccacggcctgcaagtgctgtatatcgaagacgacgaactggtgcggcgcgcc
agcgtgcagagtctgcaactggcgggcttcgacgtgatcggccatgcgtcggtggagtcc
gcggcgaagacgatcggcgcggacttctctggcgtgatcgtcagcgacattcgcttgccg
ggcgcaagcggcctcgatctgcttgcgcaatgccatgagcgcgcgcccgacgtaccggtg
atccttgtaacgggccacggcgacatttcaatggccgttcaggccatgcgcgacggcgcg
tacgacttcatcgaaaagccgttcgcgtccgagcggctgatcgaaaccgtgcggcgtgcg
ttggagcgccgcaagctggtgttggaaaacctcgcgttgcgccgtgaactggcggaacag
aactcggtggcgccgcggatcatcggcaggagcccggcgatcgaacaggtgcggcggctg
atcgccaatatcgcgccgaccgacgcctccgtgctgatcaacggcgacaccggcgcgggc
aaggagctgatcgcgcgcagtctgcatgaactgtcgccgcggcgtgacaagccgtttatc
gcggtgaactgtggcgcgctgccggagccgatgttcgaatcggaaatgttcggctacgag
ccgggcgctttcaccggcgcggcgaaacgccggatcggcaagctcgagcatgcgtcgggc
ggcacgctgtttctggacgagatcgagagcatgccgctcgcgttgcaggtcaagctgctg
cgcgtgctgcaggacggcgtgctggagcggctcggttcgaatcagcccattcgggtgaat
tgccgcgtggtcgccgccgccaagggcgatatggccgagcacgtcgcggacggctcgttc
cggcgcgatctgctgtaccggctgaatgtggtgacgatcgcgttgccgccgctgggcgag
cgtcgcgaggacatcgtgccgcttttcgaacatttcctgctggacgcggcggtgcgttat
caacgcccggcgccgatcctcaccgaccgtcagcgtgccggcctgatgcagcgcgactgg
ccgggcaacgtgcgggaactgcgcaatgccgccgaccgcttcgtgctcggcgtcgccgac
gaccccgtcatgtcgttcggcgacgacggcgcggccgcacagcctttgaaagagcgcgtc
gaacaattcgagcgggcggtgatcgccgaggcgttggagcagaccggcggcgtggtcgcc
gtcgcggcagacaagctgcaactcggcaaggcgacgctctacgagaagatcaaacgatat
ggcctcgcggccaaaggggaaggggagcggtga
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