Paraburkholderia dioscoreae: PDMSB3_0387
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Entry
PDMSB3_0387 CDS
T08115
Name
(GenBank) Transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_0387
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PDMSB3_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_DeoR
HTH_Crp_2
MarR_2
HTH_24
RP-C
HTH_11
HTH_29
CggR_N
TrmB
Motif
Other DBs
NCBI-ProteinID:
VVD26849
UniProt:
A0A5Q4Z8X0
LinkDB
All DBs
Position
I:383106..383840
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AA seq
244 aa
AA seq
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METRWSALMPDARNVTPLYLQLARNLATAIHCGVWSAGEALPSERTLSDAIGVSRITARK
AIELLVEQGLIRRARGAGSFITPRVEDPLSRLTGFTKKMQQRGFRPDSVWLERDIRAANR
DELVHLGLSPGAAVASLRRLRRADGIVMAVEHSALPAAIVPDPQAIGDSLYSYLEHRGAA
VVRALQHFRAVNASSEIAALMDIEPRSALLVITRIGYSADQRAIELTDTYCRDDYYDFVA
ELRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgctggtccgcactgatgcctgacgcccgcaacgtcacgccgctctatttg
cagctcgcgcgcaatcttgcgacagcgattcattgcggcgtgtggtcggcgggtgaagcg
ctgccctcggagcgcacgctttcggacgcgatcggcgtgtcgcgcatcacggcgcgcaag
gcgatcgagttgctggtcgagcaagggctgatccggcgcgcgcgtggcgcgggcagtttc
atcacgccgcgcgtcgaagacccgctctcgcggctcaccggtttcacgaagaagatgcag
cagcgcggtttccggccggattcggtatggctcgagcgcgatatccgcgccgccaaccgt
gacgaactggtgcatctcgggctgtcgcccggcgcggcggtggcgagtctgcggcggctg
cggcgcgcggacggcatcgtcatggcggtcgagcattcggcgctgccggcggcgatcgtg
cccgacccgcaagccatcggcgattcgctttacagctatctcgaacaccgtggcgcggct
gtcgtgcgcgcgttgcagcactttcgcgcggtcaacgcttcgagcgagatcgccgcattg
atggatatcgaaccgcgctcggcgctgctggtcattacccgtatcggctatagcgccgat
cagcgcgcaatcgagttgaccgacacgtattgccgcgacgattactacgactttgtcgct
gaattgcgcacctga
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