Paraburkholderia dioscoreae: PDMSB3_0394
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Entry
PDMSB3_0394 CDS
T08115
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00190
Oxidative phosphorylation
pdio01100
Metabolic pathways
pdio02020
Two-component system
Module
pdio_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PDMSB3_0394 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_0394 (cydB)
Enzymes [BR:
pdio01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
PDMSB3_0394 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
VVD26856
UniProt:
A0A5Q4ZCP4
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All DBs
Position
I:complement(392399..393535)
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AA seq
378 aa
AA seq
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MDYATLKLIWWVLIGVLLIGFALTDGFDMGAAILLPFIGKTDAERRIVVNTVGATWEGNQ
VWLITAGGAMFAAWPLVYAASFSGFYFAMLLVLFSLFFRPVGFDYRSKREDPRWRSAWDW
ALFVGGFVPALVFGVAFGNLLQGVPFSFDTDLRVTYHGGFFALLNPFAVLCGLVSVSMLA
AHGAAFVKMKADDIVAERASLALRIASFAAVVLFLIAGALIATMIGGYQLVDAAPLDTVA
NPLLKSVIGAPGLWLTNYATYPWMVAAPVAGLVGGVLATLLARSRFEKSAFLATSLMIIG
VILTAGFSMFPFIMPSSLDGRSSLTVWDSTSSRMTLQIMLIAVIVFLPLILIYTSWVYRV
MRGKVTAAALEENHHSMY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggattatgcaaccctcaaactgatctggtgggtgctgatcggcgtactgctgatcggc
ttcgcgctcaccgacggcttcgacatgggcgcggcgatcctgctgccgttcatcggcaag
acggacgccgagcggcgcatcgtcgtcaacacggtgggcgcgacctgggaaggcaatcag
gtctggctcatcaccgcgggcggcgcgatgttcgccgcgtggccgctggtgtacgcggcg
tcgttctccggcttctatttcgccatgctgctggtgctgttctcgctgttcttccggccg
gtcggcttcgactaccgcagcaagcgtgaagatccgcgctggcgcagcgcgtgggactgg
gcactgttcgtcggcggcttcgtgccggccctggtgttcggcgtcgcgttcggcaacctg
ctgcaaggcgtgccgttctcgttcgataccgacctgcgcgtgacctatcacggcggtttc
ttcgcgctgctcaacccgttcgcggtgctgtgcgggctcgtcagcgtgtcgatgctggcc
gcgcatggcgccgccttcgtgaagatgaaagcggacgacattgtggccgagcgcgcttcg
ctcgcgctgcggatcgcttcgttcgcggccgtggtgctgttcctgattgccggtgcgctg
atcgccacgatgatcggcggctatcagctggtcgacgccgcgccgctcgacacggtcgcc
aatccgctgctgaagagcgtgatcggcgcacccggcctgtggctgaccaactacgcgacc
tatccgtggatggtggccgcgccggtggccggtctggtgggcggcgtgctggccacgcta
ctcgcacgctcgcgtttcgagaagagcgcctttctggcgacctcgctgatgattatcggt
gtgatcctcacggcgggcttctcgatgttcccgttcatcatgccctcctcactcgacggc
cgcagcagcctcaccgtgtgggactcgacctcgagccgcatgacgctgcagatcatgctg
atcgccgtgatcgtgttcctgccgctcatcctgatctacacgagctgggtgtatcgcgtg
atgcgcggcaaggtgacggccgcggcgctcgaagaaaatcaccattcgatgtattga
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