Paraburkholderia dioscoreae: PDMSB3_0397
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Entry
PDMSB3_0397 CDS
T08115
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdio03021
]
PDMSB3_0397 (rpoH)
Transcription machinery [BR:
pdio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PDMSB3_0397 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
VVD26859
UniProt:
A0A5Q4Z8X5
LinkDB
All DBs
Position
I:complement(395779..396714)
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AA seq
311 aa
AA seq
DB search
MSHAMTLPSTLSPSSAKAASAGALALSHSSLLPGQLGNIDAYIQAVNRIPMLTPAEERQF
ATEFREQDNLESARRLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPEQ
NVRLVSYAMHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKQGLGAFTPDEIEGL
AKELNVKREEVSEMETRLSGGDIALEGQVEDGEESYAPIAYLADSHSEPTAVLASRQRDK
LQSDGIASALDALDARSRRIIEARWLKVEDDGSGGSTLHELADEFGVSAERIRQIEASAM
KKMRGALTEYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagccacgcaatgacccttccgagtactttgagcccgtcgtcggctaaggccgcttcg
gcaggtgcactggcgctctcgcattcctcgctgctgcccggccaactgggcaatatcgac
gcctacatccaggccgtaaatcggattccgatgctgacgccggcggaagaacgccagttc
gccaccgaatttcgcgagcaggacaaccttgagtccgcgcgccgcctcgtcctgtcgcac
ctgcggctggtcgtgtcgatcgcgcgcaactatctgggctatggactgccgcacgccgac
ctgattcaggaaggcaatatcggcctgatgaaggccgtgaagcgcttcgatccggagcag
aacgtgcgcctcgtgtcgtacgccatgcactggatcaaggccgagatccacgaatacatt
ctgcgcaactggcggatggtgaaagtcgccacgaccaaggcgcagcgcaagctgttcttc
aacctgcgcagccacaagcaagggctgggcgcgttcacgccggacgagatcgaaggtctc
gccaaagagctgaatgtgaagcgcgaagaagtctccgaaatggaaacgcgcctctcgggc
ggcgacatcgcgctggaaggccaggttgaagacggcgaagagtcgtacgcgccgatcgcc
tatctggccgactcgcatagcgaaccgaccgccgtgctggcttcgcgtcagcgcgacaag
ctgcaaagcgacggtattgcgagcgcgctggacgcactggacgcccgcagccgccgtatc
atcgaggcacgctggctgaaggtggaagacgacggttcaggcggctccacgctgcacgaa
ctggccgacgaattcggtgtatccgccgaacgtattcgccagatcgaggcgagcgcaatg
aagaagatgcgcggtgcactcaccgagtatgcgtaa
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