Paraburkholderia dioscoreae: PDMSB3_0416
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Entry
PDMSB3_0416 CDS
T08115
Symbol
mutY
Name
(GenBank) Adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PDMSB3_0416 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_0416 (mutY)
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PDMSB3_0416 (mutY)
DNA repair and recombination proteins [BR:
pdio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDMSB3_0416 (mutY)
Prokaryotic type
PDMSB3_0416 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
DUF6083
HHH_2
HHH_3
RecR_HhH
DUF4262
HHH_8
Motif
Other DBs
NCBI-ProteinID:
VVD26878
UniProt:
A0A5Q4ZI84
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All DBs
Position
I:412233..413294
Genome browser
AA seq
353 aa
AA seq
DB search
MPDFSSRLIAWQRQHGRHDLPWQNTRDPYRIWLSEIMLQQTQVSTVIPYYAKFLARFPTV
AALAAAPSDDVMALWAGLGYYTRARNLHRCAQVVVEQHGGAFPASVEELAELPGIGRSTA
AAIASFAFGARATILDGNVKRVLARVFGVEGFPGEKKVENAMWTLAESLLPSNASDAEVS
AYTQGLMDLGATLCVRGKPDCLRCPFAVDCVANVTGRQRLLPTARPKKTVPTRRTWMLVL
RDGNAVMLEKRPPSGIWGGLWSLPEAADETSLAERARAFGGDGAVSPLAPLTHVFTHFKL
DIEPRLAELDRGVGALGALGDADTAWVALSDLDSFGVPAPVRKLLDSLQGSLI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttttcctcgcgtctgatcgcatggcagcgtcagcatggccgccatgatttg
ccgtggcagaacacgcgggatccgtaccgcatctggctgtcggaaatcatgctgcagcag
acccaggtgtcgacggtcattccctactatgcgaagttcctcgcgcgtttcccgaccgtc
gccgcgctcgccgccgcgccgtctgacgacgtgatggcgttgtgggccggccttggctac
tacacgcgcgcgcgcaatctgcatcgctgcgcgcaagtcgtggtcgagcagcatggcggc
gcgtttccggcatcggtcgaggaactggccgagctgccgggcatcggtcgttcgacggcg
gcggcgattgcatcgttcgcattcggcgcacgcgcgacgattctcgacggcaatgtaaag
cgcgtgctggcgcgcgtgttcggcgtcgaaggtttccccggcgaaaagaaagtcgaaaac
gcaatgtggacgctggcggagtcgctgcttccgtcgaatgcatcggatgccgaagtcagc
gcgtacacgcaaggcttgatggacctcggcgcgaccctctgcgtgcgcggcaagcccgac
tgcctgcgttgcccgttcgccgtcgactgcgttgcgaacgtgacgggacgtcagcgcctg
ctgcccacggcacgtccgaaaaagaccgtgccgacgcgccgaacatggatgctggtgctg
cgtgacggcaacgcggtgatgcttgagaagcggccgccgtcgggtatctggggcggcttg
tggagcctgcccgaagccgccgacgaaacctcgctcgccgagcgtgcgcgcgctttcggc
ggcgacggtgcggtctcgccactcgcgccgctcacgcatgtgttcacgcatttcaaactg
gatatcgagccgcggctcgcggaactggatcgcggcgtgggcgcgctgggtgcgttaggc
gatgcggacacggcgtgggtcgcgctgagcgatctcgattcgttcggtgtgcccgcgccg
gtgcgcaaactgctggacagtttgcagggttcgctgatctga
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