Paraburkholderia dioscoreae: PDMSB3_0433.1
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Entry
PDMSB3_0433.1 CDS
T08115
Symbol
xylF
Name
(GenBank) D-xylose transporter subunit; periplasmic-binding component of ABC superfamily
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_0433.1 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_0433.1 (xylF)
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
PDMSB3_0433.1 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
RHH_8
BRCT
zf-C2H2_12
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
VVD31736
UniProt:
A0A5Q4ZJN8
LinkDB
All DBs
Position
II:459106..460134
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AA seq
342 aa
AA seq
DB search
MKFATRRSVLSSLVCGAVLASLSLAAPLAHASKDHPEIGFCIDDLRVERWSRDRDYFVAA
AEKLGAKVSVQSADASEERQISQIENLISRGVDVIVIVPFNSKTLGNVVAEAKKAGIKVV
SYDRLILDADVDAYISFDNEKVGELQAQGVYNAQPKGNYFLLGGAPTDNNAKMLREGQLK
ILKPAMDKGDIKVVGQQWVPEWSASTALRIVEDALTANNNKIDAIVASNDGTAGGAIQAL
AAQHLAGKVPVSGQDADLAAVKRVIAGTQTMTVYKPLKLIAGEAAKLSVALAKGQKPAYN
AQYDNGKKKVDTVLLQPTLLTKSNVDVVVKDGFYTQAQLASQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgcaacgcgtcgtagtgtgttgagttcgctcgtatgtggagcggtgctcgcc
agcctctcgcttgccgcgccgctcgcgcatgcaagcaaggatcatccggaaattggcttc
tgtatcgacgatctgcgcgtggagcgctggtcgcgcgatcgcgactacttcgtcgccgcg
gcagagaagctcggcgcgaaagtatcggtgcaatccgccgacgcgagcgaagagcggcag
atctcgcagatcgaaaacctgatctcgcgcggcgtggacgtcatcgtgatcgtgccgttc
aattcgaagacactcggcaatgtggtggccgaagcgaagaaagcgggcatcaaggtggtc
tcgtatgaccgcctgattctcgacgccgatgtcgacgcctatatctcgttcgataacgag
aaagtgggcgaattgcaggcacaaggcgtctacaacgcgcaacccaagggcaactacttc
ctgctcggcggcgcgccaaccgacaacaacgccaagatgctgcgtgaaggccagcttaaa
atcctgaagcccgcgatggacaagggcgacatcaaagtggtcggtcagcagtgggtgccg
gaatggagcgcatccacggcgctgcgcattgtcgaagatgcgctcacggcgaacaacaac
aagatcgacgcgatcgtcgcctctaacgacggcacagcgggcggcgctatccaggcgctc
gcagcgcagcacctggctggcaaggtgccggtatcgggccaggacgccgacctcgcggcg
gtcaagcgtgtgattgccggcacgcagaccatgaccgtctacaagccgctgaaactgatt
gccggcgaagcggccaagctttccgtggcacttgcgaagggccagaagccagcctataac
gcgcaatacgacaacggcaagaagaaagtcgacacggtgctcctgcaacccacgttgctt
accaagagcaatgtcgacgtagtcgtcaaggacggcttctatacccaggcccagctcgcg
agccaatga
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