Paraburkholderia dioscoreae: PDMSB3_0530.1
Help
Entry
PDMSB3_0530.1 CDS
T08115
Name
(GenBank) Selenophosphate-dependent tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_0530.1
Enzymes [BR:
pdio01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
PDMSB3_0530.1
Transfer RNA biogenesis [BR:
pdio03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PDMSB3_0530.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_16
AAA_22
AAA_28
ABC_tran
DO-GTPase2
AAA_33
NACHT
AAA_30
AAA_29
AAA_18
SMC_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
VVD31828
UniProt:
A0A5Q4ZMU7
LinkDB
All DBs
Position
II:complement(564183..565250)
Genome browser
AA seq
355 aa
AA seq
DB search
MKNLLVSLEKAGDFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTTYKQVSPFEA
TRIGAALVARNIAHHLETTFADRPRNWRPLIYCWRGGKRSGSVTTLFNMIGWQARQLEGG
YKTYRRATLDTLDSLPATFSYIALVGPTGSGKTRLLAALNAAGAQTLDLEALASHRGSLL
GAWAGVPQPSQKRFDTLLVTALRTFNPARPVFVEAESRRIGSVALPLALLDTFHRGRCVE
VLSSREDRAAFLLHDYAHLFDDPESLKAQLQRLIGLHSRERVTGWQQLVDDNRRAELARE
LIERHYDPAYARSSHEHFVQLPRALQFNFRPNGADVVDQASALLAQVDGNALAVI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaacctactcgtcagcctcgaaaaagcaggtgatttcgatgaaatcatcgacgtg
cgcacacccctcgaattcgcggaagaccatattccgggcgccctcaatgcgcccgtgcta
agcaacgaggagcgtgtgctggtcggcaccacatacaagcaggtgtctccgttcgaagcc
acgcggatcggcgcggcgctcgtcgcacgcaatatcgcgcaccatctggaaacgaccttc
gccgaccggccgcgcaactggcggccgctgatctactgctggcgcggcggcaagcgctcg
ggctcggtgaccacgctgttcaatatgatcggctggcaggcgcgtcaactggaaggcggc
tacaagacttatcggcgggccacgctcgatacgctggacagcttgccggcaacgttttca
tacatcgcgctggtgggtccgaccggcagcggcaagacacgcctgctcgcggcgttgaac
gcggcgggcgcgcagacgctggatctcgaagcgctggcctcgcaccgcggctcgctgctc
ggcgcatgggccggcgtgccgcagccgtcgcagaaacggttcgacacgctgctcgtcacc
gcgctgcgcaccttcaacccggcccggccggtgttcgtggaagcggaaagccggcgcatt
ggctccgttgcgttgccgctcgcgctgctcgacacgtttcatcggggccgctgcgtggag
gtgctgtcgagccgtgaagatcgcgcagcattcctgctgcacgactacgcgcatctgttc
gacgatccggagtcgctgaaggctcaactgcaaaggctgatcggtttgcacagccgggaa
cgtgtcacgggctggcaacagctcgtcgacgacaaccggcgcgccgaactcgcgcgcgaa
ttgatcgagcgccactacgatccggcgtacgcgcgcagcagccatgagcatttcgtccag
ttgccgcgcgcattgcagttcaattttcgccccaacggcgccgatgtcgtcgaccaggca
agcgcgctgcttgcacaggtcgacggcaacgcgctcgctgtcatctga
DBGET
integrated database retrieval system
