Paraburkholderia dioscoreae: PDMSB3_0531.1
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Entry
PDMSB3_0531.1 CDS
T08115
Symbol
selD
Name
(GenBank) Selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00450
Selenocompound metabolism
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PDMSB3_0531.1 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_0531.1 (selD)
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
PDMSB3_0531.1 (selD)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PDMSB3_0531.1 (selD)
Prokaryotic type
PDMSB3_0531.1 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
VVD31829
UniProt:
A0A5Q4ZAR7
LinkDB
All DBs
Position
II:complement(565381..566445)
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AA seq
354 aa
AA seq
DB search
MTDTSVPASTSPRLTSLSHGGGCGCKIAPGLLADLLKRSAPLPFFPDLLVGNDTADDAAV
YRLNDEQAIVATTDFFMPIVDDPFDFGRIAATNALSDVYAMGGKPLMALAIVGMPINVLP
HDVIAAVLKGGESVCAEAGIPLAGGHSIDSVEPIYGLVAIGVVDPKRVKRNAGAQAGDVL
ILGKPLGVGILSAALKKDRLDAAGYAAMIAATTKLNRPGAELSKLDGVHALTDITGFGLL
GHTLELARGSHLTARVRYADLPWLPDVVDLAEAGIFTGASGRNWDAYGKSIGLPASLPAT
ARTLLTDPQTSGGLLVSCAPQAVDEVLALFRADGFGEACVIGEMVSGEGHVDVI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacctccgtccccgcaagcacgtcgccccgtctgaccagtctgtcgcacggt
ggcggctgcggctgcaagatcgcgcccggcctgctcgccgacctgctcaaacgcagtgca
ccattgccgttctttcccgatctgctggtcggcaacgacacagccgacgacgccgccgtc
tacagactcaacgacgagcaggcgatcgtcgccaccaccgacttcttcatgccgatcgtc
gacgacccgttcgacttcggccgcatcgccgcgaccaatgcgctgtccgacgtctacgcg
atgggcggcaagccgctgatggcgctggccattgtcggcatgccgatcaatgtgctgccg
cacgacgtgatcgcagccgtgctgaagggcggcgaatccgtatgcgccgaggccggcatt
ccgctcgccggcggtcattcgatcgattcggtcgagccgatctacggcctcgtcgccatc
ggcgtggtcgacccgaagcgcgtcaagcgcaacgcgggcgcgcaggcgggcgacgtgctg
attctcggtaagccgctgggcgtcggcatcctctcggccgcgctgaagaaagaccggctg
gatgccgccggctacgcagccatgatcgccgcgacgaccaagctcaaccgtccgggcgcg
gagctgtcgaagctcgacggcgtgcatgcgctcaccgacatcaccggcttcggcctgctc
ggccacacgctggaactggcgcgtggctcgcacctgaccgcgcgcgtgcgctatgcggat
ctgccatggctgccggatgtggtcgacctggcggaagccggcattttcaccggcgcgtcg
ggacgcaactgggacgcctacggcaagagcatcggtttgcccgcctcattgccggcgacg
gcgcgcaccttgctcaccgatccgcaaacctccggtggcttgctggtctcgtgcgcgccg
caagccgtcgacgaggttctcgcgctgttccgcgccgacgggttcggcgaggcgtgcgtg
atcggtgaaatggttagcggggaaggccacgtcgacgtcatctag
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