Paraburkholderia dioscoreae: PDMSB3_0605
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Entry
PDMSB3_0605 CDS
T08115
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02010
ABC transporters
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_0605
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_0605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_0605
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PDMSB3_0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peptidase_M11
Motif
Other DBs
NCBI-ProteinID:
VVD27067
UniProt:
A0A5Q4Z5S8
LinkDB
All DBs
Position
I:complement(626544..627680)
Genome browser
AA seq
378 aa
AA seq
DB search
MKKPLLASGIPCLLTFAFSASASADTAVKIGHVAPLTGAIAHLGKDNENGARLAIEEINA
KGLRINGETVRLELDPQDDAADPRTATQVAQRLVDDRVVAVVGHMNSGTSIPASKIYSDA
NIVQISPSATNPTYTLQGFKTTYRMVATDAQQGPALAAYARNKLKVSTVAIVDDSTAYGQ
GLANEFEKAAKAAGMTVLSHDATNDKAIDFRAILTKIKGENPDAVMYGGMDATGGPFTKQ
AKDLSVRAKVLGGDGLCSEKLADLAGAAVNNVICSEAGTALESMPGGSAFQAKFQKRFGQ
PIQLYAPFTYDAVYIIVDAMKRANSVDAAKIVAAMPSVVYRGVVGETSFDSRGDLKHGVI
SLYGYKDSKRSLIEAERM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcctttactggcatcgggcatcccctgcctgctcacttttgccttctcagcc
tccgctagcgcggacaccgccgtcaagatcggacacgttgccccgctcaccggtgccatc
gctcatcttggaaaagacaatgaaaatggcgcgcgcctcgccatcgaagagatcaacgcg
aaggggctgcgtatcaacggcgagactgtccgtcttgagctggatccgcaagacgatgca
gccgatccgcgtaccgcaacacaggttgcccagcgactcgtggacgatcgcgttgtcgcc
gttgtcggccacatgaactccggcacttcgatcccggcttcgaagatctacagcgacgca
aatattgtccagatctcgccgtcggcaaccaatccgacttacacgctccagggtttcaaa
acgacttatcggatggtggctactgacgcgcagcaaggtccggcgctcgcagcgtacgcc
cgcaacaaactgaaggtttcaacggtggcgatcgttgacgacagcaccgcttacggtcaa
ggtcttgcgaacgaattcgaaaaggccgcaaaggccgccggtatgacggtcctgtcgcat
gacgccacaaacgacaaagcgatcgacttccgggcaatcctgacaaaaatcaagggcgaa
aacccggatgccgtgatgtacggcggcatggacgcgactggcggtccatttacaaaacag
gcgaaggacttgagcgtgcgggccaaagtgctcggcggcgacggcctttgtagcgagaaa
ctcgccgatctcgccggtgccgcggtcaataacgtgatctgttcggaagccggcaccgcc
ctcgagagtatgccgggcggcagcgcgttccaggcgaagttccagaagcgcttcggccag
cctattcagctatacgccccgtttacttacgacgccgtctacatcatcgtcgacgcaatg
aagcgtgccaactccgttgatgcggccaaaatcgttgcagcgatgccgtcagtcgtctat
cgcggagtcgtaggggaaaccagcttcgactcaaggggcgatctgaaacatggcgtgata
tctctttacggttataaggacagcaagcggtcccttattgaagccgaaaggatgtaa
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