Paraburkholderia dioscoreae: PDMSB3_0613.1
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Entry
PDMSB3_0613.1 CDS
T08115
Symbol
cbbL
Name
(GenBank) Ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00630
Glyoxylate and dicarboxylate metabolism
pdio00710
Carbon fixation by Calvin cycle
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
pdio01200
Carbon metabolism
Module
pdio_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PDMSB3_0613.1 (cbbL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PDMSB3_0613.1 (cbbL)
Enzymes [BR:
pdio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
PDMSB3_0613.1 (cbbL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
VVD31911
UniProt:
A0A5Q4ZIQ4
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All DBs
Position
II:642136..643635
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AA seq
499 aa
AA seq
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MNDFSQPVIDSIHKPRDAGNPRERYAAGVMKYREMGYWQPDYTPKDTDVIALFRITPQPG
VDPEEAAAAVAGESSTATWTVVWTDRLTACDMYRAKAYRVDPVPASNAGEPQYFAYIAYE
LDLFEEGSVANLTASIIGNVFGFKPLKALRLEDMRIPVAYLKTFQGPPTGIVVERERLDK
YGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQAFMHWRDRFLFAMEA
VNRAQAETGEVKGHYLNVTAGTMEDMYERAEFAKELGSCIVMIDLVIGWTAIQSMARWAR
RNDMILHLHRAGHSTYTRQRNHGISFRVIAKWLRMAGVDHAHAGTAVGKLEGDPLSVQGY
YNVCRESHNEVDLSRGIFFDQPWAGLRKVMPVASGGIHAGQMHQLLDLFGDDAILQFGGG
TIGHPAGIQAGAVANRVALEAMVKARNEGRDIVHEGPDILEAAARWCTPLKQALDTWRDV
TFNYASTDTPDFAATPTAA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcagtcaaccggtgatcgattccatacacaagccgcgcgacgcggggaac
cctcgcgaacggtacgccgcgggcgtgatgaagtaccgcgagatgggctactggcagccc
gattacacgcccaaagataccgacgtgatcgcgctctttcgcatcacgccgcagcccggc
gtcgatccggaggaggcggcggcggccgtggccggcgaatcgtcgacggcaacctggacc
gtggtgtggactgaccggctgaccgcgtgcgacatgtaccgcgcgaaagcctatcgggtc
gatccggtgccggcctcgaacgcaggcgaaccgcaatatttcgcgtacatcgcctatgaa
ctggatttgttcgaagaagggtcggtcgccaacctgacggcgtcgatcatcggcaacgtg
ttcggcttcaaaccgctcaaggcgctgcgtctcgaagacatgcgcatacctgttgcttat
ctgaagaccttccaggggccgccgaccggaatcgtcgtcgagcgtgaacggctcgacaag
tacggacggccgctgctcggcgcgaccgtcaagccgaaactgggtttgtcgggcaagaac
tatggccgcgtcgtgtacgaaggattgcgcggcgggctggattttctgaaggacgacgag
aacatcaactcgcaggcgttcatgcactggcgcgaccgttttctgtttgcgatggaagcg
gtgaatcgcgcgcaggcggagacgggcgaggtcaagggccactacctgaacgtgacggcc
ggcacgatggaggacatgtatgagcgcgccgaattcgcgaaggaactgggttcatgcatc
gtgatgatcgatctggtgatcggctggaccgcgattcagtcgatggcgcgctgggcccgc
aggaacgacatgattctgcatctgcatcgcgccgggcacagcacctatacacggcagcgc
aaccacggcatttcgtttcgcgtgatcgcgaagtggctgcgcatggcgggcgtcgatcac
gcgcatgcgggcacggcggtgggcaaactcgaaggcgatccgctttcggtgcaaggctat
tacaacgtgtgccgcgaatcgcacaacgaggtcgacctgtcgcgcgggattttcttcgac
cagccgtgggccggtctgcgcaaagtgatgccggtggcctcaggcggcattcacgcggga
cagatgcatcaactgctcgatctgttcggcgacgacgcgatcctgcagttcggcgggggc
acgatcggccacccggccggtatccaggcgggcgcggtggcgaatcgcgtcgcgctcgaa
gcgatggtgaaggcgcgcaacgagggccgcgacatcgttcacgaagggccggacattctc
gaagccgcggcacgctggtgcacgccgctcaagcaggcgctcgatacgtggcgggacgtg
accttcaactacgcgtccaccgacacgccggatttcgccgccacgccgaccgcggcgtga
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