Paraburkholderia dioscoreae: PDMSB3_0668.1
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Entry
PDMSB3_0668.1 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_0668.1
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD31966
UniProt:
A0A5Q4ZK49
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Position
II:complement(700494..701705)
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AA seq
403 aa
AA seq
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MNERVLLISPEALVKKISTVCAISGLMAASAVHAQSSVTLYGLIDAGLMYTNNVSKSGSS
GALVQATSGNINGSRFGVRGAEDLGGGLKAIFVLENGFNVQNGKLGQDGRMFGRQAYVGL
STSQFGTVTLGRQYDSLVDFVAPLSGTAGTFGDTGFAHPFDNDNLNHSVRMSNAVKYTST
NYAGLTFGGLYAFSNSTSFAVNRAYSAGASYAYGPFTAAAGYLQINGSTSTTSGSAGAVD
IVESTANGTGGFNLGADVQRTVGAGLSYKVGPAVVGFVYTHSQFQGTTSFGQTNVGNSGT
MRFDNYELNAKYALTPAINLGIADTYTDGHVGNGNNTTYGNDPKWNQVNLQAVYLLSKRT
DVYVEGMYQHAIGHRYVAFINTSGGASSTSNQVVATVGLRTRF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacgtgtgttgctcatttccccggaggcgctcgtgaaaaagatttccactgta
tgtgctatttctggcctgatggctgcctcggcagttcatgcacagagctcggtgacgctg
tacggtttgatcgatgccggcttgatgtacaccaacaacgtgtcgaaaagcggctcgagc
ggcgcgcttgtccaggcgaccagcggcaacatcaacggtagccgcttcggtgtgcgagga
gccgaagatctcggcggcgggctgaaagcgatcttcgtgctggagaacggtttcaatgtt
cagaacggcaaactgggccaggacggccggatgtttggacgccaggcttatgtcggcctc
agcacgtcgcaattcggcaccgtcacgctcggccggcaatatgattcgctggttgatttc
gtggcgcccttgtcgggcacggcgggcacgttcggcgacaccggcttcgctcacccgttc
gacaacgacaatctgaaccattcggtgcggatgagcaacgcggtcaaatacaccagcacc
aactatgcggggttgacgttcggcggcctgtacgctttttcgaacagcaccagtttcgcg
gtcaatcgcgcatacagtgccggcgcgagttatgcctacgggcctttcaccgcagccgcc
ggttatctgcagatcaacggttcgacgagcacgacttcgggcagtgcgggcgcggtcgac
atcgtggaatcgacggctaacggcacaggcggattcaatctcggcgcggatgttcagcgt
acggtaggcgcaggcctcagctacaaagtcgggccggccgtagtcggctttgtttacacg
catagccagtttcaaggaaccacgtcgttcggccagaccaatgtcggcaacagtggcacg
atgcggttcgacaactacgaactgaatgccaagtatgcgctcacgccggcgatcaacctc
ggcattgccgacacgtataccgacggccatgtcggcaacggcaacaacaccacgtacggc
aacgatccgaagtggaatcaggtcaatctgcaagcggtctatctgctgtcgaagcgcacc
gacgtctatgtcgaggggatgtatcagcacgcaatcggccaccgttatgtcgcgttcatc
aacacgtcgggcggcgcttcgtcgacttccaatcaggtcgtagccacggtcggtctgcgc
acgcgtttctga
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