Paraburkholderia dioscoreae: PDMSB3_0741
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Entry
PDMSB3_0741 CDS
T08115
Symbol
groEL
Name
(GenBank) chaperone Hsp60, peptide-dependent ATPase, heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDMSB3_0741 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdio03019
]
PDMSB3_0741 (groEL)
03110 Chaperones and folding catalysts [BR:
pdio03110
]
PDMSB3_0741 (groEL)
03029 Mitochondrial biogenesis [BR:
pdio03029
]
PDMSB3_0741 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdio04147
]
PDMSB3_0741 (groEL)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PDMSB3_0741 (groEL)
Messenger RNA biogenesis [BR:
pdio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PDMSB3_0741 (groEL)
Chaperones and folding catalysts [BR:
pdio03110
]
Heat shock proteins
HSP60 / Chaperonin
PDMSB3_0741 (groEL)
Mitochondrial biogenesis [BR:
pdio03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PDMSB3_0741 (groEL)
Exosome [BR:
pdio04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PDMSB3_0741 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PDMSB3_0741 (groEL)
Exosomal proteins of breast cancer cells
PDMSB3_0741 (groEL)
Exosomal proteins of colorectal cancer cells
PDMSB3_0741 (groEL)
Exosomal proteins of bladder cancer cells
PDMSB3_0741 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DUF373
DUF5881
Motif
Other DBs
NCBI-ProteinID:
VVD27203
UniProt:
A0A5Q4YSL7
LinkDB
All DBs
Position
I:761148..762788
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
IAEETGLTLEKATLAELGQAKRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNA
ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtcgtattcggtgattccgcccgtgccaagatggttgaaggcgtg
aacattctcgcgaacgctgtgaaggtcacgctgggcccgaagggtcgcaacgttgtgctg
gaacgcagcttcggcggcccgacggtcaccaaggacggtgtgtcggtcgcgaaagagatc
gaactgaaagacaagctccagaacatgggcgcgcaaatggtcaaggaagtcgcttccaag
accagcgacaacgcaggtgacggcaccacgaccgcaacggtcctggctcagtcgatcgtc
cgcgaaggcatgaagtacgtcgcatcgggcatgaacccgatggacctgaagcgcggtatc
gacaaggctgtattcgcagcgatcgaagaactgcgcaagatcagcaagccatgcacgacc
aacaaggaaatcgcacaagtcggcgcgatttcggcaaacagcgactcgtcgatcggcgat
cgtatcgctgaagccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctgcaagacgagctggacgttgtcgaaggtatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaacccggacaagcaggttgccgtgttggagaacccgttcgtg
ctgctgcacgacaagaaggtgtcgaacatccgtgatctgctgccggttctggaacaggtc
gccaaggctggccgtccgctgctgatcatcgcggaagacgtcgaaggcgaagcgctggct
acgctggtggtgaacaacatccgcggcattctgaagaccgttgctgtcaaggctccgggc
ttcggcgatcgtcgtaaggccatgctggaagacatcgcgatcctgaccggcggtcaggtc
atcgctgaagaaaccggcctgacgctcgaaaaggcaacgctggccgaactgggtcaagca
aagcgtatcgaagtggccaaggaaaacaccacgatcatcgacggcgcaggcgaagcggcc
aacatcgaagcacgtgtgaagcaggttcgcacgcaaatcgaagaagctacgtcggactac
gaccgtgaaaagctgcaggaacgcgttgccaagctggcaggcggtgttgcagtgatcaag
gtcggcgctgccaccgaagttgaaatgaaggaaaagaaggcacgtgtcgaagacgcactg
cacgcaacgcgcgcagctgtggaagaaggcatcgttgctggcggcggcgtcgcgctgatc
cgcgcacgtacggctatcgctggtctgaagggcgctaacgccgatcaggacgcaggtatc
aagatcgtgctgcgcgcaatggaagagccgctgcgtcagatcgtcacgaacggtggcgaa
gaagccagcgtcgtggtggcagcagttgctgctggtcagggcaactacggctacaacgca
gcaaccggcgagtacgtcgacctggtcgacgctggtgttgtcgacccgacgaaggtgacg
cgcacggcgctgcaaaacgcagcttcggtggcaggtctcctgctgacgaccgacgcagct
gtttgcgaactgccgaaggaagatgcaccgatggccggcggcatgcccggcggcatgggc
ggcatgggcatggacatgtaa
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