Paraburkholderia dioscoreae: PDMSB3_0755
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Entry
PDMSB3_0755 CDS
T08115
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00521
Streptomycin biosynthesis
pdio00523
Polyketide sugar unit biosynthesis
pdio00541
Biosynthesis of various nucleotide sugars
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01250
Biosynthesis of nucleotide sugars
Module
pdio_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PDMSB3_0755 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PDMSB3_0755 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PDMSB3_0755 (rmlC)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PDMSB3_0755 (rmlC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
VVD27217
UniProt:
A0A5Q4Z5U8
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All DBs
Position
I:775861..776412
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AA seq
183 aa
AA seq
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MAIQVTATALPEVKIIEPKVFGDARGFFFESFNAKEFAEQVEPGAEFVQDNHSRSAKGVL
RGLHYQIQNAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWAGVVLSVDNHRQLWVPPGFAH
GFVVLSESAQFLYKTTDYWFPEHERSILWNDPAIGIEWPIDCEPLLAAKDAAASRLADAE
VFA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccatccaagtaaccgctaccgcactgcctgaagtcaagatcatcgagccgaaagtg
tttggagacgcgagaggctttttcttcgagagcttcaatgcgaaggagtttgccgagcag
gtcgagccgggggccgagttcgtgcaggacaaccattcgcgctccgcgaagggcgtgctg
cgcgggctgcactatcagatccagaatgcgcagggcaaactcgtgcgggtcgtcgagggt
gaagtgttcgacgtcgctgtcgacatccgcaaaagctcgccgaatttcggcaaatgggcg
ggcgtggtgctgtcggtcgacaaccatcggcaactgtgggtgccgcccggatttgcgcat
ggcttcgtggtgttgtccgagtccgcgcagttcctctacaaaaccacggactactggttt
cccgagcacgagcgcagcattctctggaacgatccggctatcggcatcgagtggcccatc
gactgcgagccgctgctggctgcgaaagacgcggcggccagccgtcttgccgatgctgaa
gtctttgcataa
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