Paraburkholderia dioscoreae: PDMSB3_0778
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Entry
PDMSB3_0778 CDS
T08115
Symbol
capD
Name
(GenBank) Capsular polysaccharide biosynthesis protein CapD
Organism
pdio
Paraburkholderia dioscoreae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
3Beta_HSD
GDP_Man_Dehyd
CoA_binding_3
GFO_IDH_MocA
CoA_binding
NAD_binding_4
adh_short
PglD_N
TrkA_N
NAD_binding_10
Methyltransf_33
C2185-like_N
KR
FMO-like
Ubiq_DUF_assoc
Motif
Other DBs
NCBI-ProteinID:
VVD27240
UniProt:
A0A5Q4YUK6
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Position
I:804931..806808
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AA seq
625 aa
AA seq
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MFRHKASWLSFSAFAFDLCAVAGAWLAAYLIRFNGYVPVEFWSGAVRTLIWVLPVYGVMF
RIFGLYRGMWVFASLPDLMRIAKAVLAGAFVMMMVAVMVQPHPIIPRSVLAVSPLLLFLA
MGGSRALYRASKEFYLYGGLVGQGKPVVVLGAGNAGANLARELSRSSEWRLVGLLDDDPA
KQGREIYGYKVWGPISDLQHWATDMKVEHAIIAIPSASVDAQRRVATLCVRAGVRAMVLP
ALTTLTQGEAFLSRVRQIDLEDLLGREPVRIDMPHVEALLSGRVVMVTGAGGSIGSELCR
QILRFEPAQLIAFDLSEYAMYRLTEELHERFPKLSVVPVIGDAKDSLLLDQVLSRYTPHI
LFHAAAYKHVPLMEELNAWQAVRNNVLGTYRVARAAIRHDVKHFVLISTDKAVNPTNVMG
ASKRLAEMACQALQQTSTRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPEITR
FFMTIPEASQLVLQASSMGHGGEIFILDMGEPVKIVDLARDLIRLYGFSEEHIRIVFTGL
RPGEKLYEELLADDEATTRTPHPKLRIAQAREAPDNLLDELLPWLMQHRVPSDQEVRRDL
RRWVPEYQPATAPALHSVAPATRAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgacacaaagcctcatggctatcatttagcgccttcgccttcgacctctgcgcg
gtcgcaggcgcctggctcgcggcatacctgatccgcttcaacggctacgttccggtcgag
ttttggtccggcgcggtcaggacactcatctgggttcttcccgtctacggggtgatgttc
cgcatctttggcctgtacaggggcatgtgggtgttcgcgagcctgcctgacctgatgcgc
atcgcgaaagccgtgctcgccggcgcgttcgtgatgatgatggtggccgtcatggtccag
ccgcatcccatcattccgcgctccgtgctcgctgtatctccgctgctgttgtttctcgct
atgggcggttcgcgcgcgctctatcgcgcgtccaaggagttctatctctacggcggcctg
gtgggacaaggcaagccggtggtagtgctcggcgcgggcaacgccggcgcgaacctggcg
cgcgaactctcgcgttcgagcgaatggcgcctggtgggtctgctcgatgacgacccggcc
aagcagggccgcgaaatctacggctacaaggtctgggggccgattagcgacctgcagcac
tgggctacggacatgaaggtcgagcacgcgatcatcgcgatcccttcggcgtcggtcgat
gcgcagcgccgcgtggcgacgctgtgcgtacgcgccggcgtgcgggctatggtgctcccc
gcgttgaccacgctgacgcaaggcgaagcgttcctgtcgcgcgtgcgtcagatcgatctg
gaagacctgctcggccgcgagccggtgcgcatcgacatgccgcacgtcgaggcactgttg
agcggccgcgtggtgatggtgaccggcgcgggcggttcgatcggctccgaactgtgccgt
cagattctgcgcttcgaacctgcccagctgatcgctttcgatctgtccgaatacgcgatg
taccgcctcacggaagaactgcacgagcgctttccgaagctttccgtggtgccggtgata
ggcgacgcaaaagactccctgctgctcgaccaggtactgtcgcgctacacaccgcacatt
ctctttcacgccgcggcctacaagcacgtgccgctgatggaagaactgaacgcgtggcag
gcggtgcgcaacaacgtgctgggcacataccgtgtcgcgcgcgccgcgattcgccacgac
gtgaagcacttcgtgctgatttccaccgacaaggcggtgaatccgaccaatgtcatgggc
gcgagcaagcgtctcgcggaaatggcttgccaggcgttacagcagaccagcacacgcacg
cagttcgagaccgtgcggttcggcaatgtgctcggtagcgcgggcagcgtcatccccaag
tttcaacagcagatcgcgaagggtgggccggttacggtcacgcatccggaaatcacgcgc
tttttcatgacgatccccgaagcgtcgcaactcgtgctgcaagcgtcgagcatgggtcac
ggcggcgagattttcattctcgacatgggcgagcccgtcaagatcgtcgatctggcgcgc
gacctgatcagactgtatggcttcagcgaggaacatatccgcatcgtctttacggggctg
cgccccggcgagaagctctatgaggaactgctagccgacgacgaagcgaccacgcgcacg
ccgcatccgaagctgcgtatcgcgcaggcgcgtgaagcgcccgacaatctgctcgacgaa
ctgcttccctggctaatgcagcaccgtgtcccgagcgaccaggaggtccggcgcgatctg
cgccgctgggtgccggagtaccagccggctacggcgccggcgttgcatagcgtagcgccg
gcaacgcgggcttcgtaa
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