KEGG   Paraburkholderia dioscoreae: PDMSB3_0785
Entry
PDMSB3_0785       CDS       T08115                                 
Symbol
rmlB
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio00521  Streptomycin biosynthesis
pdio00523  Polyketide sugar unit biosynthesis
pdio00525  Acarbose and validamycin biosynthesis
pdio00541  Biosynthesis of various nucleotide sugars
pdio01100  Metabolic pathways
pdio01110  Biosynthesis of secondary metabolites
pdio01250  Biosynthesis of nucleotide sugars
Module
pdio_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PDMSB3_0785 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PDMSB3_0785 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    PDMSB3_0785 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PDMSB3_0785 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    PDMSB3_0785 (rmlB)
Enzymes [BR:pdio01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PDMSB3_0785 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4
Other DBs
NCBI-ProteinID: VVD27247
UniProt: A0A5Q4Z5V3
LinkDB
Position
I:815233..816294
AA seq 353 aa
MIFVTGGAGFIGANFVLDWLEISDEPVVNVDKLTYAGNLHTLKSLQRNPMHTFVCADICD
RTAMDELFAEYKPRAVLHLAAETHVDRSIHGPEKFVQTNVVGTFTLLEAARSYWSRLNDA
DKAEFRFLHVSTDEVFGSLSSTDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIASALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GTPGETYNVGGWNEKKNLEVVHTLCDLLDQLRPKAGASYHDQITYVKDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVRWYLDNQAWSDEVASGEYRKWVETNYAQRA
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgatcttcgtgacaggcggggccggttttatcggcgccaacttcgtgctcgactggctg
gaaatcagcgacgagcctgtagtgaatgtcgacaagctcacctatgccggaaatctgcac
acgctgaaatctctgcagcgcaatccgatgcatacgtttgtctgcgccgacatatgcgac
cgcactgcaatggacgagttgttcgccgaatacaaaccgcgcgcggttctccacctggcg
gcggagactcatgtcgaccggtcaattcacgggccggagaaattcgtgcagaccaatgtc
gtgggtaccttcacgctactggaagcggcacgctcgtattggagcaggttgaacgatgct
gataaagcggaattccgcttcctgcacgtctcgaccgacgaagtattcggctcgctgtcc
tctaccgacccgcagttctccgaaaccacgccttatgcgccgaacagtccttactcggcc
accaaggcgggttccgaccacctcgtgcgcgcttaccatcatacgtatgggctgccggtg
ctgaccacgaactgctcgaacaactacggtccgtaccagttccccgaaaaactgatcccg
ctgatgatcgccagcgcgctcgccggcaagccgctgccggtctacggcgacggccagaac
gtgcgcgactggctgtacgtgggtgaccactgcagcgcgatccgcgaagtgctcgcgcgc
ggcacgccgggcgagacgtacaacgtgggcggctggaacgagaagaagaacctcgaagtg
gtccacacgctgtgcgacctgctcgaccagttgcgtccgaaggcgggcgcgtcgtaccac
gaccagatcacgtatgtgaaggatcgtccgggccacgaccgccgctatgcgatcgacgcg
cgcaagctcgaacgtgagcttggatggaagcctgcggaaacgttcgaaacgggtctggcg
aagacggtccggtggtatctggacaatcaggcgtggtcggacgaagtcgcctcgggcgag
taccgcaagtgggttgagaccaactacgcgcagcgcgcgtaa

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