Paraburkholderia dioscoreae: PDMSB3_0873.1
Help
Entry
PDMSB3_0873.1 CDS
T08115
Symbol
yagS
Name
(GenBank) putative oxidoreductase with FAD-binding domain
KO
K11178
xanthine dehydrogenase YagS FAD-binding subunit [EC:
1.17.1.4
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00230
Purine metabolism
pdio01100
Metabolic pathways
pdio01120
Microbial metabolism in diverse environments
pdio01232
Nucleotide metabolism
Module
pdio_M00546
Purine degradation, xanthine => urea
pdio_M00958
Adenine ribonucleotide degradation, AMP => Urate
pdio_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PDMSB3_0873.1 (yagS)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
PDMSB3_0873.1 (yagS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Motif
Other DBs
NCBI-ProteinID:
VVD32171
UniProt:
A0A5Q4ZJC7
LinkDB
All DBs
Position
II:complement(917489..918490)
Genome browser
AA seq
333 aa
AA seq
DB search
MDAISYERAGDVAGAVRAVQQPGAVFIGGGTNLLDLMKGGVARPVRLIDITHIGGLDTVT
TLPDGGIRIGALVRNSDAANHALVREQYPLLSQAFLAGASSQLRNMATVGGNLLQRTRCG
YFYDTAFTQCNKRTPGSGCAALDGHNRTHAILGASPQCIAVNPSDMSVALAALDAVVRVS
GPAGERTIAFADFHRLPGERPDVDTTLQPGELITAVDLPPPLFSANSHYLKVRDRASYAF
ALVSVAAALQMDGDRVRTARIALGGVAHKPWRASAAEQMLNGQPLTQATLKNAAAAALRD
ARPQHDNRFKVQLAQRAIVRAVNQAAGHAGGVA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatctcttacgaacgcgccggcgacgtcgccggcgcagtgcgggcggtgcag
cagccgggtgcggtgttcatcggcggcggcaccaatctgctcgatctgatgaagggcggc
gtagcgcggccggtgcggctgatcgatatcacgcatatcggcggactcgatacggtcacg
acgctgcctgacggcggcatccggatcggcgcactggtgcgcaatagcgacgcggccaac
cacgcgctggtgcgcgagcaatacccgttgctgtcgcaagcgtttctagcgggcgcctcg
tcgcaattgcgcaatatggcgacggtcggcggcaatctgctgcaacgcacccgttgcggc
tacttctacgatacggccttcacgcaatgcaacaagcgcacaccgggcagcggttgcgcg
gcgctcgacggccacaatcgcacgcatgcgattctcggcgcgagtccccaatgcatcgcg
gtgaatccgtcggatatgagcgtggcgctcgccgcgctcgatgccgtggtgcgcgtgagc
ggccccgctggcgagcggaccattgcgttcgccgattttcaccggctgcctggcgaacgg
cccgatgtcgatacgaccttgcagcccggcgaattgattaccgccgtcgatctgccgcca
ccgctcttcagcgcgaactcccattatctgaaagtgcgtgaccgcgccagttacgcattc
gcgttggtctcggttgccgccgctttgcagatggacggcgatcgcgtgaggaccgcgcgt
atcgcgttgggcggcgtcgcgcacaagccgtggcgcgcgagcgccgcggaacagatgctc
aatggccagccgctcacgcaagccacgttgaaaaacgccgctgccgccgcattacgcgac
gcgcggccgcaacacgacaatcgtttcaaggtgcagctcgcgcagcgcgcgatcgtgcgc
gcagtgaatcaggccgccggccacgcgggaggtgtcgcatga
DBGET
integrated database retrieval system
