Paraburkholderia dioscoreae: PDMSB3_0894
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Entry
PDMSB3_0894 CDS
T08115
Name
(GenBank) conserved protein of unknown function
KO
K09800
translocation and assembly module TamB
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_0894
Transporters [BR:
pdio02000
]
Other transporters
Pores ion channels [TC:
1
]
PDMSB3_0894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
Motif
Other DBs
NCBI-ProteinID:
VVD27356
UniProt:
A0A5Q4ZDJ5
LinkDB
All DBs
Position
I:927495..931826
Genome browser
AA seq
1443 aa
AA seq
DB search
MTTDVSAQPPAQPPGAHPPGEPPRQPPGQQPPPEGPAPRRRLGRLLLKSLAWTVAVVVLL
LALAAGLLYGALTTERGTAYAWQAAVKLLGGKLSGTLESGALANGLQLRQVRWRSLDGSG
TDIQIDRVAGRWALARQPWRFTVDYLHVGTVDARIGASSSSSGPMKLPQDLRLPIQLDIR
DVQVDKLLLHQGASTTEFSRFVFHGRSDGRHHEAAIERLDTPFGAVTAAAKLDGVRPFPL
SGDIGYSGKVNNEAVQVGGHLSGSLENLIAELDASGMKLAGHARVEAEPFGDVPLQRATL
TFDHINPQAFSPGAPQADLAVRAELQPVGQGAAEAAVSGASGASGASAAQRAIAASGEHS
AQPRASGKSTAGFAVAGHVSIVNAKPGAIDQNLLPLIDANADVRLDAQTQRISNLNVRLV
KSATLTGGGALSGKHGQFDLQVAGLDLNALQATVRPTQLSGPISVRLNDDVQSVTLDLAD
PKAALRAQGKITFDPARMSFNDVRITSGKGRIDLSGALKHDANSTYNLKAQLTDFDPLTL
TSQMPSRTPVAGPAPAASSAGKSGTAQATAQAGSTAGAKSAAPADKAAAAVKNTAKAAVR
TEVAQRKTPAPKRGAPPARKIEARVNGTLSAAGMLGPVFTTKADFKLGPSVYDGLPLTGS
GTVQLAGSRILPSRANLSVAGNQVDVQGSFGARGDRLKFRVDAPELERLGFGLAGLVAAD
GDITGSFAHPNVVLNYKADSVVFSSNRIGHAEGHAELRDGANGALVFTTDARNVSAGGVD
LSTLTARLSGTRANHTLEAAATGKLQDRPLDLTLAANGKLTEAREGTRWDGTVTRLQNRG
TPSFNLESPLAVSAGPQHLTLGATRLTLEGAVLSLKTFAFDHGKIQSAGSLTDISAVRLQ
DLRRQITGEPPIVKTDLVFDGDWDFTLGSTASGHIQLKRRSGDVTVEIGRGLASLGISDI
SARAEFSGGNRLNATVHAQASRIGVIDADAHTTLVMRDGFLTVNEEGALTGNVNANVPSL
KTTGGLFGPSYLLDGHLALKLALGGTVAKPNLTGSLLGDGISATMVDQGVQLKDGVVRIA
LSQNLVDFQQVEFHGASGTLRATGRVRLDGAQPDLTASIVADKLELFAAPDRNLSLSGSA
TVANGGTLGGMEINGKFVVDHALFDMPEQSAPKLGDDVVVVRPDGSVAGERPRPVAGTNK
PIGPFAPRANIDINLGNSFRFRGQGADLGLSGTITAMSAPNLPLRAVGNVRVTPGSTYTA
FGRKLNIENGFFTFNGPVANPGINILAMRRNQQVEAGVQVTGTVQFPTAKLVSEPNVPDN
EKLSWLLFGHGTDQGNNLGQQSTMTTALALLGSASGKRIAQTFGLDEFSIGRSEVGLTDP
QVVMVSKAINEWLVIGYEQGLQSASNAIKATVNLTRYWSVAAYGGTFDGLDLLYTRRFDR
IHW
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggacgtttccgcccaacctcccgcccagccgccgggtgctcatccgccagga
gagccgccaaggcagccgccgggacagcagccgccacccgaagggcctgcgcccaggcgc
cggctcggccggttgctgctgaaatcgctcgcgtggacggtggccgtggtcgtgttgttg
ctcgcgttggcggcgggtttgctatacggcgcgctgaccacggagcgcggcaccgcctat
gcgtggcaagcggcggtgaagctgttgggcggtaagctgagcggcacgcttgaaagcggc
gcactcgccaacggcctgcaattgcggcaagtgcgctggcgcagcctcgacggcagcggc
accgatatccagatcgatcgcgtggcgggccgctgggcgctcgcgcgccaaccgtggcgc
ttcacggtcgactatctgcatgtcggcacggtggacgcgcgcatcggcgcttcgtcgtcg
agcagcgggccgatgaagctgccgcaagacctgcgcttgcccatccagctcgacattcgc
gacgtccaggtcgacaaactgttgctgcatcagggcgcgtcgacgaccgaattctcgcgc
ttcgtctttcatggacgcagcgacggtcgccatcacgaggccgcgatcgagcggctcgac
acgccgttcggcgcggtgacggcggccgcgaaactcgacggcgtgcggccgtttccgctg
agcggggacatcggctattcgggcaaggtcaacaacgaggcagtgcaggtgggcgggcat
ctgagcggctcgttagagaatctgatcgccgagctcgacgcgagcggcatgaaactcgcg
ggtcacgccagggtcgaggccgagccgttcggcgacgtgccgctacagcgcgccacgctg
accttcgatcacatcaacccgcaggcgttttcgccgggtgcgccgcaggccgatctcgcc
gtgcgggcagagttgcagccggtcgggcagggggcggcggaggcggccgtgtcgggggcg
agtggggcgagtggggccagcgcggcgcagcgcgccattgccgcaagcggcgaacacagc
gctcagccccgcgcgtcaggcaaaagcaccgccggattcgcggtcgccggccacgtttcg
atcgtcaacgccaagcccggcgcgatcgaccagaacctgctgccgctgatcgatgccaac
gccgacgtgcggctcgacgcccagacgcagcgcatctcgaacctgaacgtgcgcctcgtg
aagagcgccacgctcaccggcggcggcgcgctgagcggcaagcacgggcagttcgatctg
caggtcgccgggctcgacctgaatgcattgcaggcaacggtgcggcctacgcagctttcc
ggtccaatcagtgttcgtctgaacgacgacgtgcagagtgtcacgctcgatctcgcggac
ccaaaagcggcgctgcgcgcccaaggcaagattaccttcgatcccgcgcggatgagcttc
aacgacgtgcgcatcacgtcgggcaaaggccgcatcgatctctccggcgcgctcaagcac
gacgcgaattccacctacaacctgaaagcgcaactgaccgatttcgatccgttgacgctg
acttcgcagatgccgtcgcgcacgccggtggccggcccggcaccggcggcgagcagtgcc
ggaaagagcggaaccgcgcaggccacggcgcaagccggcagcacggctggcgcaaagagc
gcggcgcccgccgacaaagccgccgccgccgtgaaaaacaccgcgaaggcagcggtcaga
accgaagtggcccagcgcaaaacgccggcgccgaaacgcggcgcgccgcctgcccgcaag
atcgaggcgcgcgtgaacggcacgctcagcgcggccggcatgctcggcccggtcttcacg
accaaggccgacttcaagctcggtccgagcgtgtacgacggcctgccgctgaccggtagc
ggcaccgtccaactggcgggctcgcgaatcctgccgagccgcgcgaacctctcggtggcg
ggcaaccaggtggatgtgcaaggcagcttcggcgcgcgtggcgaccggctgaagtttcgc
gtcgatgcgccggaactggagcgcctcggcttcggtctggcggggctcgtcgctgccgat
ggcgacatcaccggctcgttcgcgcatccgaatgtggtgctgaactacaaggcggacagc
gtggtgttcagcagcaaccgcatcggtcatgcggaaggccacgcggaactgcgcgacggc
gcgaacggcgcgctcgtctttaccaccgacgcacgcaatgtcagcgcgggcggcgtcgat
ctgagcacgctcacggcgcgcttgtccggcacgcgcgccaatcacacgctcgaggcggcg
gccaccggcaagctgcaggaccgtccgctcgatctcacgctcgccgccaacggcaagctg
accgaagcgcgcgaaggcacgcgctgggacggcacggtcacccgcttgcagaatcgcggc
acgccgtcgttcaatctggagtcgccgctcgccgtcagcgccgggccgcagcacctgacg
ctcggcgcgacgaggctcacgctcgaaggcgcggtgctgagcctgaaaacgttcgccttc
gaccacggcaagattcagtcggcgggcagcctgactgacatttcggccgtgcgccttcag
gatctgcggcgccagatcaccggcgagccgccgatcgtcaaaaccgacctggtgttcgac
ggcgactgggacttcacgctcggcagcacggcgagcggccacatccagctgaagcgccgt
agcggcgacgttacggtcgagatcggccggggcctcgcttccctgggcatttcggatatc
agcgcgcgcgctgagttcagcggcggcaaccggctcaacgccacggtgcatgcgcaggca
agccgcatcggcgtgatcgacgccgacgcgcacaccacgttggtcatgcgcgacggcttc
ctgaccgtcaacgaagagggcgcgcttaccggcaatgtgaatgccaatgtgccgtcgctg
aaaacgaccggcggcctgttcggtccgagctatctgctcgacggccacctcgcgctcaag
ctcgcgctcggcggcacggtcgccaaaccgaacctgaccggctcgctgctcggcgacgga
atttccgcgacgatggtcgaccagggcgtgcaattaaaggatggcgtggtgcgtatcgcg
ctctcgcagaatctggtcgacttccagcaggtcgagtttcacggcgcgagcggcacgttg
cgcgccaccgggcgcgtgcgtctggacggtgcccagccggacctgaccgcgagcatcgtc
gcggacaagctcgaattgttcgcggcgccggaccgtaacctgtcgctgtcgggcagcgcg
accgtggcgaacggcgggacgctgggcggcatggagatcaacggcaaattcgtggtcgat
cacgcgttgttcgacatgccggagcagtccgcgccgaagctcggcgacgacgtggtggtg
gtgcgccccgacggttcggtggcgggcgagcggccgcggcccgtggcgggcaccaacaag
ccgatcggcccgttcgcgccgcgcgccaatattgacatcaacctgggcaacagcttccgc
ttccgcggtcagggcgcggatctgggcctgagcggtacgatcaccgccatgagcgcgccg
aatttgccgctgcgcgcagtggggaacgtgcgtgtcacgcctggttcgacctataccgcg
ttcggccgcaagctcaatatcgaaaacggcttcttcacgttcaacggtccggtggccaat
cccggcatcaacatcctcgccatgcgccgcaatcagcaggtcgaggcgggcgtgcaggtc
acgggcacggttcaattcccgaccgcgaagctggtgtccgaaccgaacgtgccggataac
gaaaagctctcgtggctgctgttcggtcatggcacggatcagggcaacaacctgggtcaa
cagagcaccatgacgacggcgctcgcgttgctcggcagcgcgagcggcaagcggatcgcg
cagactttcgggctcgacgagttctccattgggcgaagcgaagtcggactgaccgatccg
caggtggtgatggtgtcgaaggcgatcaacgagtggctcgtgatcggctacgaacagggg
ctgcagtcggcgagcaatgcgatcaaggcgaccgtcaacctgacgcggtactggtcggtt
gcggcttatggcggcacgttcgacggcctcgatctgctctacacgcggcgcttcgaccgg
atccactggtga
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