Paraburkholderia dioscoreae: PDMSB3_0900
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Entry
PDMSB3_0900 CDS
T08115
Name
(GenBank) Ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00330
Arginine and proline metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PDMSB3_0900
Enzymes [BR:
pdio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PDMSB3_0900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
SP2_C
Motif
Other DBs
NCBI-ProteinID:
VVD27362
UniProt:
A0A5Q4Z1Q5
LinkDB
All DBs
Position
I:938394..940679
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AA seq
761 aa
AA seq
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MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGAEVLGLTSYGDLTSFAQQSSRASCF
ILSIDDDELLPYVDNVVVEGETPELAAAIVALRAFVTEVRRRNADIPIFLYGETRTSRHL
PNDILRELHGFIHMFEDTPEFVARHIIRETKVYLDSLAPPFFKELVQYADEGSYSWHCPG
HSGGVAFLKSPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSAD
HVFFVTNGTSTSNKIVWHGTVAPGDIVLVDRNCHKSILHAITMTGSIPVFLTPTRNNFGI
IGPIPRSEFEPENIKKKILANPFAREALAKNPELKPRILTITQSTYDGVIYNVEMIKEML
GDWLDTLHFDEAWLPHAEFHEFYQDMHAIGAGRPRIGAMVFATHSTHKLLAGISQASQIV
VQDSKNSRFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEAPGGTALVEESIAEALDF
RRAMSKVDAEYGDDWFFKVWGPDQFAEEGIGSREDWMLRPNDPWHGFGPLADGFNMLDPI
KATIVTPGLDMDGGFGESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSM
VTELQQFKDDYDNNQPLWRVLPEFVSHHPMYERVGLRDLCEQIHSVYRANDIARLTTEMY
LSSMEPAMKPSDAFAKLAHREIDRVPIDELEGRVTSILLTPYPPGIPLLIPGERFNRTIV
NYLRFAREFNERFPGFHTDIHGLVGETINGRIEYFVDCVRG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgttttcccgtcgtcatcatcgacgaagatttccgctccgagaacatctcg
ggttccggcatccgggctctggccgaagctatcgagaaagaaggcgcggaagtgctcggg
ttgacgagctacggcgatctgacctcgttcgcgcagcagtcgagccgcgcctcgtgcttc
atcctctcgatcgacgacgacgaactgctgccgtacgtcgataacgtcgtggtggaaggc
gagacgccggaactggccgccgcgatcgtcgcgctgcgcgcgttcgtgaccgaagtgcgc
cgccgcaacgccgacattccgatcttcctgtacggcgaaacgcgcacctcgcgccacctg
ccgaacgacatcctgcgcgaactgcacggcttcatccacatgttcgaggacacgccggag
ttcgtcgcgcgccatatcatccgcgagaccaaggtgtatctggattcgctcgcgccgccg
ttcttcaaggaactggtgcagtacgcggacgaaggctcgtactcgtggcactgtccgggc
cactcgggcggcgtcgcgttcctgaagagcccgctcggccagatgttccaccagttcttc
ggcgagaacatgctgcgcgcggacgtgtgcaatgccgtcgacgaactcggccagttgctg
gaccataccggtccggtggcggcttccgaacgcaacgcggcgcgcatcttcagcgcggac
cacgtgttcttcgtgaccaacggcacgtccacgtcgaacaagatcgtctggcacggtacg
gtagcgcccggcgacatcgtgctggtggaccgcaactgccacaagtcgatcctgcacgcg
atcaccatgaccggctcgattccggtgttcctcacgccgacgcgcaacaacttcggcatc
atcggtccgattccgcgcagcgagttcgagccggaaaacatcaagaagaagattctggcg
aacccgttcgcccgcgaagcgctcgcgaagaatccggagctcaagccgcgcatcctgacc
attacgcaaagtacctacgacggcgtgatctacaacgtcgagatgatcaaggaaatgctg
ggcgactggctcgacacgctgcacttcgacgaagcctggctgccgcacgcggaattccac
gagttctatcaggacatgcacgcaatcggcgcggggcgtccgcgcatcggcgcgatggtg
ttcgccacgcactccacgcacaagctgctggccggcatttcgcaggcttcgcagatcgtc
gtgcaggattcgaagaacagccgcttcgacaagcatcgtttcaatgaagcgtatctgatg
cacacgtcgaccagcccgcagtacgcgatcatcgcctcgtgcgacgtggccgcggcgatg
atggaagcgccgggcggcaccgcgctcgtcgaagagtcgatcgcggaggcgttggacttc
cgccgcgcaatgagcaaggtcgacgccgaatatggcgacgactggttcttcaaggtgtgg
ggcccggatcagttcgccgaagaaggcatcggctcgcgcgaagactggatgctgcgtccg
aacgatccgtggcacggtttcggaccgctcgcagacggcttcaacatgctcgacccgatc
aaggcaacgatcgtcacgccgggtctggatatggacggcggcttcggcgagtcgggtatt
ccggccgcgatcgtcacgaagtatctggccgagcacggcatcatcgtcgagaagaccggg
ctgtattcgttcttcatcatgttcacgatcggcatcaccaagggccgctggaactcgatg
gtcaccgaactccagcagttcaaggacgactacgacaacaaccagccgctgtggcgcgtg
ctgcccgagttcgtctcgcatcatccgatgtacgagcgcgtcggcctgcgcgatctgtgc
gagcagattcacagtgtctaccgcgcgaacgacattgcgcgcctgacgaccgagatgtac
ctgtcgagcatggaaccggccatgaagccttcggatgcgttcgccaagctcgcgcaccgc
gagatcgaccgcgtgcctatcgacgaactggaaggccgcgtcacgtcgatcctgctgacg
ccgtatccgccgggtattccgttgctgattccgggcgaacgcttcaacaggaccatcgtc
aactatctgcgttttgcgcgcgagttcaacgagcgcttcccgggtttccacacggacatc
cacgggcttgtcggcgaaacgatcaacgggcgcatcgaatacttcgtcgattgcgttcgc
ggctga
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