Paraburkholderia dioscoreae: PDMSB3_0920
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Entry
PDMSB3_0920 CDS
T08115
Name
(GenBank) Outer membrane protein (Porin)
KO
K03285
general bacterial porin, GBP family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
PDMSB3_0920
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
VVD27382
UniProt:
A0A5Q4Z1Q7
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Position
I:956606..957757
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AA seq
383 aa
AA seq
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MTKKLVLGATVAASLIAPLAHAQNSVTLYGLIDAGLMYTNNVKKGSSQGSLIQATSGNIN
GSQFGVRGNEDLGGGLHAVFVLENGFNIQNGKLGQNNRLFGRQAYVGIDSAQYGTLTLGR
QYDSGVDFVAPLSEVASSFGKTGFSHPFDNDNLDYSVRINNAVKFNSHSIAGLKFGGLYA
FSNSTDFSSNRVYSVGASYGQGPLNLAASYLQINGSNSANTSGAIDTAESTANGTGGFQL
GADVQRVAAAGVNYAFGPAVLGFVYSHSQYQGTKSFGSAGGTVRFDNFEVNGRYALTPAL
KAGIAYVYTDGHVSHTTTYGADPKWNQVNAQLIYSLSKRTDVYAEGMYQHVSGKQYVAFV
NTSGGASSSANQVVGTVGLRTRF
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaagaagcttgtcttgggcgctactgtcgcggcgagtctgatcgctccgctcgcg
catgcccagaattcagtcacactctacggcctgatcgacgccggactcatgtacacgaat
aacgtcaagaaagggtcttcccaaggctctctcattcaggcgacgagcggcaacatcaac
gggagtcagttcggcgtgcgcggcaacgaggatctcggcggcggacttcatgcagtcttc
gtgctcgagaacgggttcaacatccagaatggcaagctcgggcagaacaaccgtctgttc
ggccgccaggcttacgttggtatcgacagtgcccaatacgggacgctgacgcttggccgc
cagtacgattcgggtgtcgacttcgtggcgccgttatccgaagtggcttcgtcgttcgga
aagacaggcttctcgcacccattcgacaacgataatctggactactctgtccgcatcaac
aacgctgtcaagttcaatagccacagcattgcaggtttgaagttcggaggactttatgcg
ttctccaacagcacggacttcagttcgaatcgcgtatacagcgttggggcaagctacggg
caggggccgttaaacctggcggccagctacctgcagatcaatggatcgaacagcgcgaat
acctccggcgcaatcgacaccgccgaatcgacagcaaacggcacgggcggattccagctc
ggcgcggacgtgcagcgcgtggccgccgccggcgtgaactacgcgtttggccccgctgtg
ctcggctttgtgtattcgcatagccagtatcaaggtacgaagtcatttgggtcggctggc
ggcacggtgcgcttcgacaatttcgaagtgaacggccgttatgcgctgacgccggctctg
aaggcgggcatcgcttacgtctacacggacggccatgtgagtcacacgacgacctacggc
gcagaccccaaatggaatcaggttaatgcgcaactgatctattcgctttcaaagcgaacc
gatgtctacgcggaaggcatgtatcagcacgtgagcggcaagcagtacgttgcgtttgtc
aacacatcgggcggcgcgtcgtcgagtgccaaccaggtggtcggaaccgttggattacgg
acccggttttaa
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