Paraburkholderia dioscoreae: PDMSB3_1046
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Entry
PDMSB3_1046 CDS
T08115
Name
(GenBank) Ribose transport system substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02010
ABC transporters
pdio02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_1046
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PDMSB3_1046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_1046
Transporters [BR:
pdio02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PDMSB3_1046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
UDPG_MGDP_dh_C
Synapsin_C
Motif
Other DBs
NCBI-ProteinID:
VVD27508
UniProt:
A0A5Q4ZJD0
LinkDB
All DBs
Position
I:1075122..1076237
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AA seq
371 aa
AA seq
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MKRAKRGGIPLAAAVGLAVASLATSLTSVAADTYMPACYKPAPGVTTTIKYPARPGPYRV
ALVNGYTGIPWRTQMIQESRAWAARPENARNIKELKVVSTGADVAAQIAAVDNFIEAGYD
VIAFDPVNPKAFDAVIRRAKKAGAILVSFDNPVDNAEILQITPEWTRFESIRTQATLDQM
PVKKGRLLEVRGPAGNAADRDLHAGVQKIVSNYKDIQVTEVVGNWDTGTVQKVVSDAIAV
NGNFDAVTCQYGCQGVTRALQAAHSPAIPVGGDAANGFVKALAAQKLPGVAVSTSPGQGP
VALQAAVALLQGKTFPTRAYLPIPYVLTKDMKPDVNYFPNLPDTYETVASYVDCGISFTP
QEVNKFLADNN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcaaagagaggtggcattcctttggcggcagcagttggtctggcggtagca
tcgctggccacgtcgctgacatcggtggcggctgatacgtacatgccagcctgctacaag
cccgcgccgggcgtcacaacgacgattaagtacccggcgcgcccgggcccgtacagggta
gcactggtcaacggttataccggtatcccctggcgtacccagatgattcaggaaagccgt
gcgtgggcagcgcgaccggagaatgcgcgcaacatcaaggaactgaaagtcgttagcacg
ggagccgatgtcgcggcgcaaatcgcggcggtcgacaacttcattgaagccggctacgac
gtgattgcatttgacccggtcaaccccaaggcattcgatgcagtcatccgccgcgcaaaa
aaggcgggagcaatcctggtgtcgtttgacaatccggtcgacaacgcagagatactgcag
attacgccggagtggacccgcttcgagtcgattcgtacccaggccactcttgaccagatg
ccggtcaagaagggcagactgctcgaagtccgggggccggctggcaacgcggctgaccgg
gacctccatgctggtgtgcagaagattgtcagcaactacaaggacattcaggtcaccgag
gttgtcggcaactgggatacaggtacggtccagaaggttgtctccgatgcaatcgccgtg
aacggaaacttcgacgcggtaacttgccagtatggctgccagggcgtcacgcgcgcactt
caagccgcgcacagcccagcaatccctgtcggtggcgatgccgctaatggctttgtaaaa
gcgctcgctgcacagaagcttccgggtgtcgctgtctctacctcgcctggccaaggtccg
gttgccctgcaggcagcggtggcgctcctgcaaggaaagacattcccgacccgggcgtat
ctgccgattccgtatgtcctgacgaaggacatgaaacccgacgtcaattatttccccaat
ctcccggacacgtacgaaacggtagcgagctacgtggactgcggcatctccttcacgcca
caggaagtcaacaaattcctggctgacaacaactga
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