Paraburkholderia dioscoreae: PDMSB3_1056
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Entry
PDMSB3_1056 CDS
T08115
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit, FAD-linked
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00630
Glyoxylate and dicarboxylate metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PDMSB3_1056 (glcD)
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
PDMSB3_1056 (glcD)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
VVD27518
UniProt:
A0A5Q4ZJD7
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Position
I:complement(1086036..1087535)
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AA seq
499 aa
AA seq
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MSYQYDEKFDGALASYDKTRAVAELHSLLPDLDILHELEDLRPYECDGLSAYRTTPMMVV
LPERVEQVQAILRFAHARSIPIVARGAGTGLSGGALPLEKGILLVMARFNRILDVDVEAC
TACVQPGVRNLAISQAAAPFGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNIQ
KLEVLTIEGEQLTFGSDALDSPGFDLLALMTGSEGMLGIVVEVTVKLLVKPRSAKVLLAS
FDDIGKAGAAVAEIIGAGVIPGGLEMMDNLAIRAAEDFIHAGYPVDAQAILLCELDGAES
DVDEDCAMVDALLRKVGATDVRLAGSEAERQRFWAGRKNAFPAVGRISPDYYCMDGTIPR
RELPRVLKGIEDLSVEHGLRVANVFHAGDGNMHPLILFDANTPGEMDLAEALGARILELC
VAVGGSITGEHGVGREKINQMCAQFSSDELSLFHAVKAAFDPGGLLNPGKNIPTLHRCAE
FGSMHVHHGAVPFPELERF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaatacgacgaaaaattcgacggcgcgctggcgtcttatgacaagacgcgg
gccgtcgcggagcttcactctctgctgcccgatttggatattctgcatgagctggaggac
ctgcgcccttacgaatgcgatggtctctctgcttatcgaacgacgccgatgatggtcgtg
cttcccgaacgcgtcgaacaagtgcaggcaatactgcgcttcgctcacgcgcgcagcatc
ccaattgtcgcgcgcggcgccggcaccggcctgtcgggaggtgcactaccgcttgagaag
ggcattctcctcgtgatggccaggttcaatcgcatccttgatgttgacgttgaggcttgc
acagcatgtgttcagcccggggtgcgtaaccttgccatctcccaggcggccgcgcccttc
ggtctgtactatgcgccggacccgtcgtcgcagatagcctgttcaatcggtggcaacgta
gccgagaacgcagggggcgtgcactgcctgaaatacgggctgaccgtgcacaacatccaa
aaactcgaggtgctcacgatagaaggcgagcagctcaccttcggctcggacgcgctcgat
tcgccaggattcgacctgctggccctcatgaccggttcggaaggcatgctgggcatcgtc
gtggaagtgacggtcaaacttctggtcaaaccgcgaagcgcaaaggtattgctggcctca
ttcgatgatatcggcaaggccggcgctgcggtcgcagaaatcatcggcgcgggggtcatc
cccggcggcctcgagatgatggacaacctcgcgattcgggcagccgaagacttcattcac
gcgggctacccggttgatgcgcaggctattctcctgtgcgaactcgacggcgctgaaagc
gatgtcgacgaagattgcgcaatggtcgacgcgttgttgcgcaaagtgggcgcaaccgat
gtgaggctggctgggagcgaagcagaacggcagcggttctgggcgggccggaaaaacgcg
ttcccggcagtcggccgcatctcgcccgactattactgcatggacggcaccattccgcga
cgagagttgccgcgtgtgctcaagggcatcgaagacctgtcggtcgaacacggtttgcgc
gtggctaatgtctttcacgcaggcgacggcaacatgcatcccctcatcctcttcgatgcg
aacacaccgggggaaatggacctggccgaagcgttgggcgcccgcatccttgagctttgc
gtggccgtcggcggcagcattaccggcgaacacggagtgggccgcgagaaaatcaaccag
atgtgcgcccagttcagctctgacgagttgtcgctttttcacgccgtcaaggctgcattc
gacccgggcggccttctcaatccgggcaagaacatccctacgctgcatcgctgtgccgaa
ttcggctcgatgcacgttcaccatggcgccgtgccttttccagagctggagcgattctga
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