Paraburkholderia dioscoreae: PDMSB3_1221
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Entry
PDMSB3_1221 CDS
T08115
Name
(GenBank) DNA segregation ATPase, FtsK/SpoIIIE family
KO
K03466
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdio03036
]
PDMSB3_1221
Chromosome and associated proteins [BR:
pdio03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PDMSB3_1221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsK_SpoIIIE
FtsK_alpha
FtsK_gamma
AAA_10
DUF87
FtsK_4TM
DEAD
TrwB_AAD_bind
T2SSE
AAA_29
P-loop_TraG
nSTAND1
Adeno_IVa2
DUF815
Motif
Other DBs
NCBI-ProteinID:
VVD27683
UniProt:
A0A5Q4YSS7
LinkDB
All DBs
Position
I:complement(1246298..1250485)
Genome browser
AA seq
1395 aa
AA seq
DB search
MHTVVFGWFGGSAVWFIPLLWRLVKSALPGGAGLRGPGTIRLWLGFVCVLVASCTLEASL
IDVAGVNGFGHALAAGFGRLLGHIGTPLAALALLLVSLPWLLDFRWRDFAAWADGAFGLG
LSRSLAKRDEEARRHRSADDGLPSHVSPSTNTMAPKTNGRYARPTVWRPPARGRDAASGA
AAAAAGKDAAARGAGASWRTGAATPRSQATQAEPVLRTGAATTPPRHVPMQTQPLNADKA
AWMPAEPVAPAGWLRDAGPRAAAPAAGSMAGSGVSGAAARDSALQVGRRSAGEQRPVGSS
GGAAGLASGAGFAVAGVARAAGAASTASAAGAAGAATAVKTAQVARAAPANHTTATARAV
PGAASHTATGATGNTTGAGRPSTTAKGTTAPVSSVNRTAAPLQAFSPASHSSDVTPTQAT
RQPPSYTRPMPTTQKEAPPASVQETLRSIAENAARWTDLAGVSLARSSGAETAKVASAPD
DVPSFEGLQSRVDVPRTDAVETPLTLDAPVSSGKVVESGWAGSPVKTPVDSPRMEASLDA
PLEAGHEPAVQWPIEPPIIRPPLTAAPVVEPAPASQYVPPVATPTPFQIFAAQLHASEAD
PDASPFEDDSVQSTPLADSHASLGAEVAPTLSQPADQLEVIAPKITEAPTASAIAEQVKE
TASVIEPQAAAPAPVAEVVIDKTLVPWEAELDAVLPQHAPSSLSGPAVGSVAASSAVVHT
HDVTPSPGVAQPDESAVQVETETVDSPALPDASEASGLLTGAQAANTATAATAVPPRDIV
PHASDSSTTPPAANTTTAAPPDIAQHASNVVRFPGFAFHAAPLASDVVADEPVAVEDLPN
ETAISPAASAPLTAVPLAATPPAAPNGPATASTEPVEPAVQRPPLRGHSPANGFEFRAPA
ASMVELPTLDLLAPADIDVQPVSEEKLIETGLLIEQRLQEFKVPVTVVGASAGPVITRFE
VEPALGVRGSQIVGLMKDLSRGLGLTSIRVVETIPGKTCMGLELPNAKRQTIRLSEILEA
SVYQNSHSQLTLAMGKDITGHPVVADLAKAPHMLVAGTTGSGKSVAINAMICSLLYKATP
EEVRLIMIDPKMLELSVYEGIPHLLAPVVTDMKLAANALNWCVGEMEKRYRLMSAVGVRN
LAGFNQKIRDTEAKGKKLGNPFSLTPEAPEPLAPLPLIVVVIDELADLMMVAGKKIEELI
ARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRVAFQVSSKIDSRTILDQMGAESL
LGQGDMLFLPPGTGYPQRVHGAFVADEEVHRIVEYLKQFGEPQYEEGILDGPATEGGAAQ
DLFGEAPDAEADPLYDEAVAFVVRTRRASISSVQRQLRIGYNRAARLVEQMETAGLVSAM
GINGSREVLAPGPAE
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggtagttttcggctggttcggcgggtcggccgtctggttcattcctcttttg
tggcgtctcgtgaagtcggcgctgccgggcggcgcgggtctgcgcgggcccggcacgatc
cggctctggctcggcttcgtctgcgtgctggtggcgagctgcacgctcgaggcgtcgctg
atcgatgtggccggcgtgaatggcttcggccatgcgctggccgcgggtttcggccgtctg
ctcgggcatatcggcacgccgctggcggcgctcgcgctgctgctcgtcagcctgccctgg
ctgctcgatttccgctggcgcgattttgctgcatgggccgacggcgcgttcggcctcggc
ctatcgcgcagcctcgccaaacgcgacgaggaagcgcgccgtcatcgcagcgccgacgac
ggtttgccgtcgcacgtttcaccgtccaccaatacgatggcacccaaaaccaacggacgt
tatgcgcggcccacggtctggcggccgccggcacgcggacgcgacgcggcgtcgggcgct
gcggcggcagccgcgggcaaggacgcggcggcgcgtggtgcaggcgcgagctggcgcact
ggggcggcaacgccgcgcagccaggcgacgcaggccgagccggtgctgcgcactggcgcc
gcgacgacaccgccgcggcatgtaccgatgcaaacgcaaccacttaacgcggacaaagct
gcgtggatgccggccgagccggtcgcgccggctggctggctgcgcgacgccgggccgcgc
gcggctgcgccggcagcgggttcgatggcgggatcgggtgtatccggcgccgcggctcgc
gacagcgcattgcaggttggacgtcgttcggcaggcgagcagcggccggtgggatcgtcg
gggggcgctgcgggactggcttcaggcgcgggcttcgctgttgcgggtgttgcgcgtgct
gcgggcgcggcgagtactgcgagcgccgcgggtgctgcgggagcagctacggcggttaag
acagcgcaagtagctcgtgcagcaccagctaatcacaccacggcaacggcgcgtgccgtg
ccgggcgcggcctcgcacacggctacgggtgctacggggaacacgaccggcgcgggccgt
ccgtcgacgaccgccaaaggcacgaccgccccggtgtcttccgtcaatcgcacggcggcg
cctctgcaagctttctcgcccgcctcgcattcgagcgacgtcacgccgacgcaggcaaca
cgtcagccgcccagttacacgcggccgatgcccacgacacagaaagaagcgccacccgcc
agtgtgcaggagacgctgcgcagcatcgcggaaaacgccgcccgctggaccgaccttgcc
ggggtcagtctcgcgcgcagcagcggcgcggagaccgcgaaggtcgcgagcgcacccgac
gacgtgccatctttcgagggactgcaatcgagggtggatgtgccgcgaacggacgcggtt
gaaacgcctttgacgctggatgcgccggtgtcttcggggaaagttgtcgaaagtgggtgg
gccggaagcccggtaaagacgccggtcgattcgccgcggatggaagcctcgttggatgca
ccgctggaggctggccacgagcccgccgtgcaatggccgatcgagccgccgatcattcgg
ccgccgttgacggcggcaccggtagtggagcctgcacctgcatcgcagtatgtgccaccg
gtcgcgacgcctacgccgttccagatcttcgcggcgcagttgcacgcaagcgaagcagac
ccggatgcatcgccgttcgaagacgattccgtgcagtcgacacctctcgccgacagccac
gcaagcctgggcgccgaagtcgcgccgacgctcagccagccggcggatcaattggaagtc
atcgcgccgaagattaccgaggcgccgactgcttctgcgatcgccgaacaggtgaaagaa
accgcatcggttatcgagccgcaagccgctgcgcctgcgccggtcgcggaagtcgtgatc
gataaaacacttgtgccttgggaagccgagcttgatgccgtcttgccgcaacatgcgcct
tcgtcgttgagcgggccggctgtcggcagcgtcgctgcgtcgagtgcagttgtccacacg
cacgacgtcacgccttcgccgggcgtcgcgcaaccggacgaatccgcagtacaggtcgaa
acggaaacggtggactcccctgccctgccggacgcatccgaagcatcgggcttgctaacc
ggtgcgcaagctgcaaacacagcgaccgcggcgaccgcagtgccgccgcgagacatcgtg
ccgcacgcgtcggactcgtccaccactccgcccgcggcaaacacaaccaccgctgcaccg
cccgacatcgcgcagcacgcatcgaacgtggttcgctttccgggctttgcgtttcacgcc
gcgcccctcgcgtccgatgtcgtcgccgacgaaccggtcgccgtagaagaccttcccaac
gaaaccgcgatctcaccggcagcatcggcaccgctcaccgcagtcccgctcgccgcaaca
cccccggccgcaccgaacggtcccgcaaccgcatccacggaacccgtcgaacccgccgtc
caacgtccgccgctgcgcggccacagccccgccaacggcttcgaattccgcgcgcccgcg
gcgtcgatggtcgaactgcccacgctcgatctgctcgcgcccgcggacatcgacgtccaa
ccggtctccgaagaaaagctgatcgaaaccggcctgctgatcgaacaacgtctgcaggaa
ttcaaggtgccggtcacggtcgtcggcgcgtcggccggcccggtcatcacgcgcttcgaa
gtcgagccggcgctcggcgtgcgcggcagccagatcgtcggtctgatgaaggatctgtcg
cgcggcctcggcctgacatccatccgcgtggtcgagacgattcccggcaagacctgcatg
ggcctcgagttgccgaacgccaagcgtcagacgatccgcctatccgaaattctcgaagcg
agcgtctatcagaattcgcattcgcaactgacgctcgccatgggcaaggacattaccggc
catccggtggtcgccgatctggccaaggcgccgcacatgctggtcgccggcacgaccggt
tcgggcaagtcggtggcgatcaacgcgatgatctgctcgctgctctacaaggcgacgccc
gaagaagtgcgcctcatcatgatcgatccgaagatgctggagctctcggtctacgagggc
attccgcatctgctcgcgccggtcgtcaccgacatgaagctggccgccaacgcgctgaac
tggtgtgtcggcgaaatggaaaaacgctaccgcctgatgtcggcggtcggcgtgcgcaat
ctggccggcttcaaccagaaaatccgcgacaccgaagccaagggcaagaagctcggcaat
ccgttctcgctgacgcctgaagcgcccgagccgctcgcgccgctgccgctgatcgtggtc
gtgatcgacgaactggccgacctgatgatggtggccggcaagaagatcgaagagctgatc
gcacggcttgcgcagaaggcgcgcgctgccggcatccacctgattctggcgacgcagcgt
ccttcggtggacgtgatcaccggcctcatcaaggcgaacattccgacgcgcgtggcgttc
caggtgtcgtcgaagatcgactcgcgcacgattctcgatcagatgggcgccgagtcgctg
ctcggccagggcgacatgctgttcctgccgcccggcacgggctatccgcaacgggtgcac
ggcgcgttcgtcgccgacgaggaagtgcatcggatcgtcgagtatctgaagcagttcggc
gagccgcagtacgaggaaggcattctggacggcccggccaccgaaggcggcgcggcgcag
gatctgttcggcgaagcgccggacgcggaagccgatccgctctacgacgaagccgtcgcc
ttcgtggtgcgcacgcggcgcgcgtcgatctcgtcggtgcagcggcagttgcgcatcggt
tacaaccgcgcggcgcgtctcgtcgagcagatggaaaccgcgggtctcgtatccgcgatg
ggcatcaacggcagccgcgaagtgctggcgcccgggccggcggaataa
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