Paraburkholderia dioscoreae: PDMSB3_1235
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Entry
PDMSB3_1235 CDS
T08115
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDMSB3_1235 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_1235 (msbA)
Enzymes [BR:
pdio01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PDMSB3_1235 (msbA)
Transporters [BR:
pdio02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PDMSB3_1235 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
DEAD
AAA
RsgA_GTPase
AAA_22
AAA_25
AAA_30
AAA_24
NACHT
AAA_28
Zeta_toxin
AAA_21
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
VVD27697
UniProt:
A0A5Q4Z626
LinkDB
All DBs
Position
I:1265715..1267508
Genome browser
AA seq
597 aa
AA seq
DB search
MSAKPTLSKPIGSGEASSPAVVFRRLWPYIKPLIWVLIGAIVAMAVSAATDAAIPALLKP
LLDKGFGAHANDRAKWFVPAAVIGLALIRSLSQYASGYLLAYVTNKILLDLRLKMFDRMI
HTSVAFFQRETASTVINAIVFEVNQILNVLLSVLVTLVRDSLTVVFLLGYLFYLNWRLTL
IVAVLLPAIGWLVGKINRRLRRLNREHQLLTNELSYIVEESVGGYKVVKVHNGEQYEMER
FESMSKRLRGYAMRMTVSGGLAQPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVT
SMLLIISPLKHLMDVNQPLQRGMTACEMIFGLIDEPSEPEGGGKPLERAHGEVEFRDVSF
VYSGNATHNRHTLDKVSFRVAPGEMVALAGPSGSGKTTLVNLLPRFFDPTGGQILVDGVA
IPEYDLHALRSQIAMVSQDVVLFNDTVANNVAYGQVADSDRVKAALRAANLWDTVEAMPK
GIETLVGDNGMMLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMK
GRTTLVIAHRLSTIERANRILVMEAGQIVESGSHRELLAQDGLYAHLHRIQFQQSAA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcgaagccaacgttaagcaaacccatcggttcaggtgaggcgtcgtcgcccgcc
gtcgtctttcgacgtttgtggccgtatatcaagccgctgatctgggttctcattggtgcg
atcgtcgcgatggccgtcagcgccgcgaccgacgccgcgatccccgccttgctcaagcct
ttgctggacaagggtttcggcgcgcatgccaacgacagggccaagtggttcgtgccggcc
gcggtgatcggcctcgcactgattcgcagcctgtcgcaatacgcgtccgggtatctgctc
gcttacgtgacgaacaagatcctgctcgacctgcgcctgaagatgttcgaccgcatgatt
cacacgagcgtcgcgttcttccagcgcgaaaccgcgagtaccgtgatcaacgcgatcgtg
ttcgaggtgaaccagattctcaacgtgctgctgagcgtgctggtcacgctggtgcgcgat
tcgctcactgtggtcttcctgctcggctatctgttctatctgaactggcgtttgacgctg
atcgtcgcggtgctgctgccggcgatcggctggctggtcggcaagatcaaccgccggctg
cgccgcctgaaccgcgagcatcaactgctgaccaatgagctgtcgtacatcgtcgaagag
tcggtgggcggctacaaggtcgtcaaggtgcacaacggcgagcagtacgagatggaacgc
ttcgagtcgatgagcaagcgtctgcgcggctacgccatgcgcatgacggtgtccggtggc
ctcgcgcagccgttgacgcagttcctcgcgtcgattgcgctcgctgtcgtgatcacgatc
gcggtggtgcagtcgtcgtcggatcagaccacggtgggcgggttcgtcgctttcgtcaca
tcgatgctgctcatcatttcgccgctcaagcacctgatggacgtgaaccagccgctgcag
cgcggcatgacggcgtgcgaaatgatcttcggcctgatcgacgagccgtccgagccggaa
ggcggcggcaagccgctcgaacgcgcgcacggcgaggtggaattccgcgacgtctcgttc
gtgtacagcggcaacgccacgcacaaccgccacacgctcgacaaggtgtcgttccgggtg
gcgccgggcgaaatggtcgcgctcgcgggcccgtcgggcagcggcaagaccacgctggtg
aatctgctgccgcgctttttcgatccgaccggcggtcagattctggtcgatggcgtggcg
atccccgaatacgatttgcatgcgctgcgcagccagatcgcgatggtgagccaggacgtg
gtgctgttcaacgacacggtcgccaataacgtcgcgtacgggcaggtcgccgactccgac
agggtcaaggcggcgctacgcgcggccaatttgtgggacaccgtcgaggccatgccgaag
ggcatcgagacgctggtcggcgacaacggcatgatgctctcgggcggccagcggcagcgt
ctcgcgatcgcgcgcgcgatctacaaggacgcgccgatcctgatcctcgacgaagcgacg
tcggcgctggactcggaatcggaacgccatgtgcaggccgcgctggaaaccttgatgaag
ggccgcacgacgctggtcatcgcgcaccgcctgtcgaccatcgagcgcgccaaccggatc
ctggtgatggaagcggggcagatcgtcgagagcggcagtcatcgcgaactgctggcgcaa
gacgggctgtacgcgcatctgcaccgtatccagttccagcagagcgcggcgtaa
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