Paraburkholderia dioscoreae: PDMSB3_1264
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Entry
PDMSB3_1264 CDS
T08115
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdio03019
]
PDMSB3_1264 (rng)
03009 Ribosome biogenesis [BR:
pdio03009
]
PDMSB3_1264 (rng)
Messenger RNA biogenesis [BR:
pdio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PDMSB3_1264 (rng)
Ribosome biogenesis [BR:
pdio03009
]
Prokaryotic type
rRNA processing factors
PDMSB3_1264 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
VVD27726
UniProt:
A0A5Q4ZE86
LinkDB
All DBs
Position
I:complement(1290857..1292326)
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AA seq
489 aa
AA seq
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MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRIAGEPQHQAPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE
ELAGDVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDETSRIQVDSRETYQ
MLADFAAEFTPAVSSKLHHYTGERPLFDLYNIESEIQRALSRRVDLKSGGYLVIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRDQV
LGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPRTV
CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaaatcctgatcaatgtcacgccgcaggaaacgcgcgtcgcgctggtccag
caaggcgccgtccaggaacttcacgtcgaacgaacgctgtcgcgcggacgcgtcggcaac
gtctatctcggcaaggtcgtacgcgtgctgccgggcatgcaatccgccttcatcgacatc
ggtctcgaacgcgcggcgttccttcatgtcgccgacatctggcatccgcgcattgccggc
gaaccgcagcatcaggcgccgcatcagccgatcgaaaaaatcgtcttcgagggccagacg
ctgatggtgcaggtcgtgaaggatccgatcggcaccaagggcgcgcggctatccacgcag
gtgagcattgccgggcgcacgctcgtgtatctgccgcaggagccgcatatcggcatctcg
cagaagatcgagagcgaagccgagcgcgaggccgtgcgagcgcgtctgaccgccgtgctg
cccgccgacgagaaaggcggctacatcgtgcgcaccatcgccgaagatgcgacgagtgag
gaactggccggcgacgtcgcgtatctgcgcaagacgtgggccaccattctgtcgcaaggc
cagcgcatgccgcccacgagcctgctatatcaggacttgaatctcgcgcaacgcgtgctg
cgcgatttcgtcaacgacgagacatcgcgcattcaggtcgattctcgcgagacgtatcag
atgctggccgatttcgcggccgagttcacaccggcggtgtcgtcgaagctgcaccactac
accggcgagcggccgctctttgatctgtacaacatcgagtccgaaatccagcgcgcgttg
tcgcgccgggtggatctgaagtccggcggctatctcgtgatcgaccagaccgaagcgatg
acgaccatcgacgtgaacaccggcggctacgtcggcgctcgcaacttcgacgatacgatc
ttcaagaccaacctcgaagccgcgcacaccattgcacggcaattgcgtctgcgcaatctg
ggcggcgtgatcattatcgacttcatcgatatggaaaacgtcgagcatcgcgatcaggtg
ctgggcgaattgaaaaaggcgctctcgcgcgatcgcacgcgcgtgaccgtgaatggtttt
tcgcagctcggcctggttgagatgacgcgcaagcgcacgcgtgaatcgcttgctcatgtg
ctgtgcgagccttgtccggtttgccagggcaaggggcaggtcaagacgccgcgcacggtg
tgttacgacgtgctgcgcgagattctgcgcgagtcacggcagttcaatccgcgcgagttt
cgcgtggtggcgtcgcagcaggtgatcgatctgtttctcgaagaagagtcgcagcatctg
gcaatgttgatcgattttatcggtaagccggtgtcgttgcaggtggagtcgaatttgagt
caggagcagtacgatattgttttgatgtag
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