Paraburkholderia dioscoreae: PDMSB3_1380
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Entry
PDMSB3_1380 CDS
T08115
Symbol
hmrR
Name
(GenBank) HTH-type transcriptional regulator HmrR
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1380 (hmrR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pdio01504
]
PDMSB3_1380 (hmrR)
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PDMSB3_1380 (hmrR)
Antimicrobial resistance genes [BR:
pdio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
PDMSB3_1380 (hmrR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
Unstab_antitox
SAM_GIDA_C
Motif
Other DBs
NCBI-ProteinID:
VVD27837
UniProt:
A0A5Q4Z656
LinkDB
All DBs
Position
I:1403430..1403852
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AA seq
140 aa
AA seq
DB search
MNIGEAARVSGVTAKMIRYYESVGLLAAKARTSAGYRVYGPQEVHSLRFIRQARRLGFLV
EDIRRLLALWHDRSRASAEVKTIALEHVAELDRRIAELTDMRDTLAHLADHCHGDDRPDC
PIIERLADTDLVSGQGCHPI
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggtgaagcggcccgcgtgtcgggcgtcacggcgaaaatgattcgctactac
gaaagcgtcggcttgctggcggccaaagcgcgcacgagcgccggctatcgcgtatacggc
ccgcaagaggttcattcgttgcgcttcatccgccaggcgcgccggctcggctttctggtc
gaagacattcgacggctgctcgcactgtggcacgatcgctcgcgcgccagcgccgaagtg
aagacgattgcgctggaacacgttgcagagctggatcgacgcatcgccgaactgaccgat
atgcgcgacacgttggcgcacctggccgaccattgccacggcgacgaccgccccgattgc
ccaattatcgaacgccttgccgataccgacctggtttcagggcagggttgtcatccgatt
tga
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integrated database retrieval system
