KEGG   Paraburkholderia dioscoreae: PDMSB3_1410
Entry
PDMSB3_1410       CDS       T08115                                 
Symbol
hrpA
Name
(GenBank) Type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
pdio  Paraburkholderia dioscoreae
Pathway
pdio03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdio00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PDMSB3_1410 (hrpA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdio02044]
    PDMSB3_1410 (hrpA)
Secretion system [BR:pdio02044]
 Type III secretion system
  Type III secretion core apparatus
   PDMSB3_1410 (hrpA)
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 CSS-motif
Other DBs
NCBI-ProteinID: VVD27867
UniProt: A0A5Q4Z662
LinkDB
Position
I:1430700..1432829
AA seq 709 aa
MLIMSRNGSPNKKGGGGPQFLPSCATGAAMFQVAGQLALAWAVFLAPEAEAATPVWHGAP
IHYAANGAPLPDVLRDVLAVEGLSADIARDVKGVVNGRFDDTPGNVFMQLVEAYGLVWYF
DGKAMHVATAAGVRSQVIPFAPMTREAVASLLRNLDLDDPRLPIRYSATTAKVAGPVAFV
DAVAEAIDKAQRQSTAEPSFDQTEIRIFPLRYAQAQDMHYTVGSQDQVVPGVASLLRRVM
MDTWQAVAPRAAARSRADVRADARSARGAPPPLPSLRGLGLAGGASADGDSAPPPLPDAA
TSEPGRTDQPSATPARRNIIADPRTNSVVINDLVSMMPNYERAIAMLDQPQELVEIDAVV
IDVSSSAARSLGVAWGGSNGRVSAASGTINSPLTFGAPALATAAGVASGLNLATLVGNSA
QYLFAQIHALEDAGQARVLSSPQVLTLNNMEAVLTSHSSVYVRVAGNQDVDLYNIDTGLT
LKVTPSIESAAEPRRNIRLNIQIDDGAFNTSMSVDGIPKVDNHSIVTQAIVRDGESLLVG
GYQYERSESTTSKVPVLGDVPYVGALFRDTQTTRERLERLILITPRLKRAGGNGEPASGA
VTAGQAVMTGGAGPDFAPAAAFAPAAGTGPGLSAQATRMTPPTLRVATNVPTATTVPGTA
NPSAAVTAALRTLPASAAPTAPLPSASSPPPLPAWQPTRKMPWDDRHDR
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgcttatcatgagccgaaatggttcgcccaataagaagggtggcggcggaccgcagttc
ttgccatcgtgcgcgacgggtgccgccatgtttcaggtggcgggtcagcttgcgctggcc
tgggcggtgtttctggcccccgaggctgaggccgctacgcctgtctggcacggcgcaccg
atccactatgccgcgaacggcgcgccgttgccggacgtgttgcgcgacgtgctcgcggtg
gaagggctgtccgcggacatcgcccgcgacgtgaagggcgtggtcaacggccgtttcgac
gacacgcccggcaacgtcttcatgcagttggtcgaggcttacggccttgtctggtatttc
gacggcaaggcgatgcacgtcgcaaccgccgcaggagtgcgcagccaggtgatcccgttt
gcgccgatgacccgcgaagcggttgcgtcgttgctgcgcaacctcgatctggacgacccg
cgcctgccgatcaggtactccgcgacgaccgcgaaggtcgccggcccggtggcttttgtc
gacgccgtggccgaggcgatcgacaaggcgcagcggcagagcaccgcggagccgtcgttc
gaccagaccgagattcgcattttcccgctgcgctacgcgcaggcgcaggacatgcactat
acggtgggatcgcaggaccaggtggtgcccggggtggcctcgctactgcggcgggtcatg
atggacacctggcaggctgtcgcgccgcgcgcggcggcccgctcacgcgccgatgtccgc
gccgatgcccgcagcgcgcgcggcgctccgccgccgttgccgagcctgcgcggtctgggt
ctcgccggcggcgcatcggccgacggcgacagcgcgccgccgccattgcccgatgcggca
acctcggagccgggccggaccgatcagcccagcgcgacgcctgcgcgacgcaacatcatc
gcggacccgcgcaccaactccgtggtgatcaacgacctcgtgtcgatgatgccgaactac
gagcgcgccattgcgatgctcgaccagccgcaagaactggtcgagatcgacgcggtcgtg
atcgacgtatcgtcgagcgcggcgcgctcgctgggcgtggcgtggggcggatcgaacggg
cgggtcagcgcggcgtcggggaccatcaactcgccgttgactttcggtgcgccggctctc
gcgaccgcggccggcgtggcgagcggactgaatctcgccactctggtcggcaattcggcg
caatacctgttcgcgcagatccacgcgctggaagacgccggccaggcccgtgtgctgtcg
agtccgcaagtcctcacgctgaacaatatggaagcggtgctgacttcgcacagctcggtt
tatgtgcgggtggcgggcaaccaggacgtcgacctctacaacatcgacaccggtctcacg
ctgaaggtcacgccgagcattgaatcggccgctgagccgcgccgcaatatccggctcaac
atccagatcgacgatggcgcgttcaatacgtcgatgtcggtcgacggcattccgaaagtc
gacaaccattcgatcgtcacccaggcgatcgtgcgcgacggcgagagtctgctggtcggc
gggtatcaatatgagcgcagcgaaagcacgacttcgaaagtgccggtgctcggcgacgtg
ccttacgtcggcgcgttgtttcgcgatacccagacgacgcgggagcggctcgagcgattg
atcctgattacaccgcgcctgaaacgcgcgggtggcaatggagaaccggccagtggggcg
gtcacggcggggcaagccgtgatgaccggaggcgcggggccggactttgcgcccgccgcc
gcttttgcgcccgctgcgggcaccgggccaggattgtccgcgcaggcgacacggatgacg
ccgccgacgcttcgagtggccaccaacgtcccgacggccaccacagtcccgggcaccgcc
aacccgtccgcagccgtcaccgccgcgctgcggacgctgccggcgagcgctgccccgact
gcgccgctgccgtccgcgtcgtcgccaccgccactgcccgcgtggcagccgacacgcaag
atgccttgggatgaccgccatgaccgctga

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