Paraburkholderia dioscoreae: PDMSB3_1478 Help Entry PDMSB3_1478       CDS       T08115                                  Name (GenBank) UvrABC system protein A   KO K03701   excinuclease ABC subunit A Organism pdio  Paraburkholderia dioscoreae Pathway pdio03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pdio00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     PDMSB3_1478  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pdio03400]     PDMSB3_1478 DNA repair and recombination proteins [BR:pdio03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      PDMSB3_1478   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       PDMSB3_1478 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_29 AAA_21 SMC_N AAA_16 nSTAND1 AAA_25 AAA_22 AAA_33 RsgA_GTPase AAA_23 AAA_18 NACHT Viral_helicase1 nSTAND3 UvrA_DNA-bind ATPase DnaJ_CXXCXGXG DUF4350 SbcC_Walker_B RNA12 DUF87 Motif Other DBs NCBI-ProteinID:  VVD27935 UniProt:  A0A5Q4YSV8 LinkDB All DBs Position I:1504765..1510650 Genome browser AA seq 1961 aa AA seqDB search MASNGIIRIRGARQHNLKNVDLDVRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF SAYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE LFDRKTARQVRHDTPETIYAELLERTAQNELRLVVTFPVELPESASEQEVEQWLSASGYT RVQAQREVDSPTGKRKLLDVVADRFRLRSVDKQRVVEAIEASLKRGGGRVNIYVLPASSE GPEAQEAEPQIWRFSTGLHSPESDLRYADPQPALFSFNSAYGACEVCRGFGRVIGVDLGL VIPDARKTLRDGAIKPMQTPAWKECQDDLMRYAAKADIRRGTPWGELTDAERDWVINGSP DWNGKWQSHWYGVKRFFEYLESKAYKMHIRVLLSKYRSYTPCETCGGARLKTESLLWRLG SKANADDVLPAGKRFLPRGVDWTREQLEALPGLTVHDLMLMPIERIRRFFDEVSLPSALL DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL DEPSIGLHPRDLNRIVEAMHRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGSII YDGVPEAIRSSGTLTGEYLGGRRHVADSAHWSQRPVNDTTPRIVLEGATEHNLRDVTVEI PLERLVCVTGVSGSGKSTLLQDVLYPAMARHFGLATESPGAFRSLSGADQVTDVVFVDQS PIGKTARSNPASYVGAFDEIRKLFAKAPLAQQRGYGPGMFSFNSGDGRCPTCGGSGFEHI EMQFLSDVYLRCPDCDGRRYRAELLEVKIERGEPARALSIADVLELTVSEATAFFAKDAE VLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAQARTARNAKQPVAKRLF MFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRSADWLIDLGPEGGDGGGR VLCVGTPEDVKTCPESHTGEALLQYDRAMNTAAEPASQGLPLQKALSAARARRAVEGEDV VRIVNAREHNLKSLDVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRYLESLNAYARS IVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCIHD GTPVTSQSVESIAAQLLRDHKGQHVGFLAPLVVNRKGVYTDLAKWAKARGNTHLRVDGEF VPVDPWPKLDRFREHTIELPVTDLVVSPDHETELRQALDQTLEVGKGVMHLLAPLDGLHD AMSGGRPTAQLGAVKVLSTKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGLALTRE QRAAYDDTIVVDDNRGREQSLPSEEQEPEGLVDEPCPDCAGTRLNPTARAVTFNAQSIVD VAQWTVSDTRAWIDTLEMTGRDAEIARDVISEIGSRLQFLEEVGLGYLSLDRAAPSLSGG EAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLNALRKLGEKGNTLVVVEHDEDT IRRADHIIDIGPGAGKRGGTLVAQGSVADLSAQPDSVTGQFLANPIVHPLQPRREVVAAS KRMAAVPENWLTVHGGKLHNLRNVTVGIPLSRLVAVTGVSGSGKSTLARDVLMTNLLDAV GRSVLSSPATRRARAAAEEKPAANRRSSVLARTAPRAQLNVTHAWQGCDSITGWETIDRV LEVDQTPIGKTPRSCPATYIGVWDAIRKLFAGTLEARARGYTVSRFSFNTGEGRCPACEG QGVRTIGMSFLPDVKVPCDVCRGQRFNPETLAVTWRGKNIGDVLTMEIDEAVEFFAPISN IAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKPPHTLYVL DEPTVGLHMADVARLIRVLHRLADGGHSVVVIEHDLDVIAEADWIIDLGPEGGVGGGSIV AATDPEGLARVDASHTGAALRPVLARSRDNHTIVAGEGTNG NT seq 5886 nt NT seq  +upstreamnt  +downstreamnt ttggcatctaacggcattatcaggattcgcggcgcgcgccagcacaacctcaagaacgtc gatctcgacgtacgaaccggcgaaatgacggtcgtgaccggcccgtccggctccggcaag tcgagcctcgtgttcgacacgctttatgcggaagggcagcggcgctacgtcgaaacgttc agtgcttacgcacggcagtttctggaccgcatggaccggccgcaagtcgaccgcgtcgac ggcgtgccgcccgccatcgcgatcgaccagaccaatccggtgcgcagttcgcgctccacc gtcggcaccatgacggagctcaacgatcacctgaagctcctttacgcgcgcgcggccgaa ctgttcgaccgcaagacggcccggcaggtgcggcacgatacgccggaaacgatctacgcg gagttgctcgagcgcaccgcgcagaacgagctgcggctcgtcgtcacgttcccggtcgaa ctgccggagtcggcgtcggagcaggaagtggagcagtggctgtcggcgagcggctacacg cgcgttcaggcgcagcgcgaagtcgattcgcccacgggtaagcgcaaactgctcgacgtg gtggcggaccgcttccggctgcggtcggtggacaagcagcgagtggtcgaggcgatcgag gcgtcgctcaagcgcggcggcgggcgcgtcaatatttacgtgctgccggcgtcgtccgaa gggccggaagctcaggaagccgaaccgcaaatctggcgcttctccaccgggttgcatagc cccgaaagcgatctgcgctacgcggacccgcagcccgcgctgttctcgttcaactcggcg tacggcgcgtgcgaagtctgccgcggtttcggccgcgtaatcggcgtcgacctcgggctg gtgattccggacgcgcgcaagacgctgcgcgacggtgcgatcaagcccatgcaaacgccg gcctggaaggaatgccaggacgatctgatgcgctacgcggcgaaagcggatattcgccgc ggcacgccgtggggcgaactgacggacgccgagcgcgactgggtcatcaacggctcgccc gactggaacggcaagtggcaaagccactggtacggtgtcaaacgcttcttcgaatatctc gaatcgaaagcgtacaagatgcatatccgtgtgctgctgtccaagtaccgcagctatacg ccgtgcgaaacctgcggcggcgcacgcctgaaaaccgaatcgctgttgtggcgcctcggc agcaaggcgaatgcggacgacgtgttgccggccgggaagcgcttcctgccgcgcggcgtc gactggacgcgcgaacaactcgaagcgttgccgggtctgaccgtgcacgacctgatgctg atgccgatcgagcgtatccggcgcttcttcgacgaagtcagcttgccgagcgcgctgctc gacgatgcgctcaaactgctgctcgccgaagtgcgcacgcgcctcaaatatctgtgcgac gtgggcctcggttatctcacgctcgaccggcaaagccgcacgttgtcgggcggcgaggtg cagcggatcaacctgaccacggcgctcggcacgtcgctcaccaagacgcttttcgtgctc gacgaaccgagcatcggcctgcatccgcgcgacctgaaccgcatcgtcgaagccatgcac cgcttgcgcgacgcgggtaatacgctggtggtggtcgagcacgatccctctgtcatgctc gcggcggatcgtctgatcgacatgggcccagggccgggcgagcgcggcggctcgatcatt tacgacggcgtgcccgaggcgatccgttcctccggcacgctcaccggtgagtatctcggc ggccgccggcatgtggcggactcggcgcactggtcacagcgtccggtgaatgacaccacg ccgcgcatcgtgctggaaggcgcgacggaacacaatctgcgcgatgtcacggtggagatt ccgctggagcggctcgtctgtgtgacgggggtatcgggttccggcaaatccacgctgctg caagacgtgctgtatccggccatggcgcgccacttcggtcttgccaccgaatcgccgggc gcattcagaagcctgagcggcgccgatcaggtcaccgacgtcgtgttcgtcgaccaatcg ccgatcggcaagaccgcgcgttcgaacccggccagttatgtcggcgcgttcgacgaaatc cgtaaactgttcgccaaggcgccgctcgcgcagcaacgcggctatggcccgggcatgttc agcttcaactcgggtgacggccgctgcccgacctgcggcggctcgggtttcgaacatatc gaaatgcagttcctgagcgacgtgtacctgcgttgccccgattgcgacgggcgccgttat cgcgcggaactgctcgaagtgaagatcgaacgcggcgaaccggcgcgcgcgctgagcatt gccgacgtgctggaattgacggtgagcgaagcaaccgccttctttgccaaagacgccgaa gtgctgcgcgtgctgcagccaatcgtcgacgtgggtctcgaatacgtgaagctcggccag ccggtgcccacgttgtcgggcggcgaagcacaacggctcaagctcgccgggtttctcgcg gaatcggctcaggcgcgcaccgcgcgcaacgcgaagcagccggtcgcgaagcgtctgttc atgttcgacgaaccgaccaccggcctgcatttcgacgacatcgccaagctgatgcaagcg ttcggcaaactgctcgcgagcggtcattcgctgatcgtgatcgagcacaacctcgatgtg atccgctctgccgactggctgatcgacctcggtcccgaaggtggcgacggcggcggccgg gtgctgtgcgtcggcacgccggaagacgtcaagacgtgcccggaatcgcataccggcgaa gcgctgctgcaatacgaccgcgccatgaacacagcggctgagccggcgtcgcaaggcctt ccgctgcagaaggcgctgagcgcggcgcgtgcgcgccgcgccgtcgaaggcgaggacgtg gtgcgcatcgtcaatgcgcgcgagcacaacctgaaatcgctggacgtggacattccacac ggcaaattcaacgtgattaccggggtctccggttcgggcaagtccacgctcgctttcgat attctgttccacgaagggcagcgccgttacctcgaatcgctcaatgcctacgcgcgttcc atcgtgcagccggcggggcggcccgaggtggacgcggtgtacggcattccgccgaccgtc gcgatcgagcagcggctttcgcgcggcggccgcaagagtaccgtggcgaccacgtccgag gtgtggcacttcctgcgtctgctgtatgtgaagctcggtctgcagcattgcattcacgac ggcacgccggttacgtcgcaaagcgtcgaatcgatcgcggcgcagttgctgcgcgatcac aaagggcagcacgttggttttctcgcgccgctggtcgtgaatcgcaagggcgtctataca gatctggcgaagtgggcgaaagcacgcggcaatacgcatctgcgtgtggatggcgaattc gtgccggtggacccgtggccgaagctcgaccgcttccgcgagcatacgatcgagttaccc gtgaccgatctcgtcgtgtcgccggaccatgaaaccgagttgcgtcaggcgctcgaccag acgctggaagtgggcaagggcgtgatgcatctgctggcgccgctcgacggtttgcacgac gcgatgagcggcggccgtcctacggcgcaactcggcgccgtgaaggtgctgtccaccaag cgcgcgtgtccggtgtgcggcacgagctatcccgagcttgacccgcgcatgttctcgtat aacagcaagcatggctggtgtacgacctgcgtgggcacgggtctcgcgctcacgcgcgag cagcgcgccgcctacgacgacacgatcgtcgtcgacgacaatcgtggccgcgaacagagc ctgccttcggaagagcaggagcccgaaggcctcgtggatgaaccgtgtccggactgcgcg ggcacgcgtctgaatcccaccgcacgcgcggtcacgttcaacgcgcagtccattgtcgac gtcgcgcaatggaccgtgtccgacacgcgcgcgtggatcgacacactggaaatgaccggt cgcgacgcagaaatcgcgcgtgacgtgatcagcgaaatcggcagccgcctgcagtttctc gaagaagtcggactcggctatctgagtctcgatcgcgccgcgccgagtctctcgggtggc gaggcgcagcgtattcgtctcgccgcgcaactcggcagcaatctgcaaggcgtgtgctac gtactcgacgaaccgaccatcggcctgcatccacgcgacaatcagattctgctgaacgct ctgcgcaagctgggcgagaagggcaacacgctggtggtcgtcgaacacgacgaggacacc atccggcgtgccgatcacatcatcgacatcgggccgggcgcaggcaagcgcggcggcacg ctggtcgcgcagggcagtgtggcggatctgtcggcgcagcccgattccgtgacagggcag tttctcgccaaccctatcgtgcatccgttgcagccgcgtcgcgaagtggtcgcggcgagc aagcgcatggccgcggtgccggaaaactggctgaccgtacacggcggcaaactgcacaac ctgcgcaacgtcacagtcggcattccgctatcgcggttggtggcggtcacgggcgtcagc ggttccggcaagtcgaccctagcacgcgacgtgttgatgaccaatctgctggatgcggtc gggcggtcggtgctatcgtcgccggccacgcggcgcgcacgtgccgcggccgaggagaag cccgcggcgaaccggcgctccagcgtgctggcgcgcacggcgccgcgcgcgcaattgaac gtgacgcatgcatggcaaggttgcgattcgatcaccggctgggagactatcgaccgcgtg cttgaagtcgatcaaacgccgatcggcaagacgccgcgttcgtgtcctgccacttacata ggcgtgtgggacgcgatccgcaaactgttcgccggcacgctcgaagcgcgtgcgcgcggc tatacggtctcgcgtttctcgttcaacacgggcgaaggccgttgcccggcctgcgagggg cagggcgtgcgcaccatcggcatgagctttctgcccgatgtgaaagtgccttgcgatgta tgtcgcgggcagcgcttcaatcccgagacgctcgcggtcacatggcgcggcaagaatatc ggcgacgtgctgaccatggaaatcgacgaagccgtcgagtttttcgcgcccatctcgaac attgctcatccgttgcagttgatgaaagacgtcgggctcggctatctcacgctgggtcaa ccttcgcccacgttgtcgggtggcgaagcgcagcgtatcaagctcgtcaccgaattgagc aaggtgcgcgacgacattacgcggcgcggtcagaagccgccgcacaccttatatgtactg gacgaaccgaccgtgggcctgcatatggccgacgtcgccaggctgattcgcgtgctgcat cgtctcgcggacggcggccatagcgtcgtcgtcatcgagcacgatctggacgtgatcgcc gaggcggactggatcatcgatctcggtccggagggtggcgtgggcggcgggtcgattgtc gccgccacggatcccgaaggactcgcccgcgttgacgcaagtcatacaggcgccgcgttg cggcccgttctcgcgcgatcgcgggacaaccacaccatcgttgcgggcgaaggcacgaac ggttga

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