Paraburkholderia dioscoreae: PDMSB3_1529
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Entry
PDMSB3_1529 CDS
T08115
Symbol
cfxR
Name
(GenBank) HTH-type transcriptional regulator CfxR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1529 (cfxR)
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PDMSB3_1529 (cfxR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
SBP_bac_3
NMT1_3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
VVD27985
UniProt:
A0A5Q4YSW5
LinkDB
All DBs
Position
I:1571038..1572009
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AA seq
323 aa
AA seq
DB search
MLKAATFRQLKALHTVAKLGSVSRAAEELRLTQPAVSLQVRLLEEAAGAPLLQRVGRGVQ
LTAAGEILARYALEILDLWNGAADDLAALHGEQGGTLRIGAITTAEYLIPPFLVRFTESR
PQVKVQFKVGNRADIIRMLATHEIDLAVMGSAPRELRTVATAFAKHPMAFVASPAHALMK
KKRLSLDDLQSANLFVRERGSGTRSTVENLFRLAGLKLHIGSELSSNEAIKQLVEAGLGI
AFLSLHACSLEFQAGLLALLPLSANPIERDWYVMHVSDKRLPHVASLFRDFLIEHGMSGA
VPVPLPTVAAARKRRQARQADGA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagccgctacgtttcgtcagttgaaggccttgcatacggtggcgaagctcggc
agcgtgtcgcgcgcggccgaagaattgcggctcacgcagccggctgtttcgctacaggtg
cgtttgctggaagaggctgcgggtgcgccgctattgcagcgcgtagggcgtggcgtgcag
ttgaccgcggccggtgagattctcgcccgctatgcgctggaaatcctcgacctgtggaac
ggcgcggcggacgatctggccgcgttgcacggcgagcagggcggcacgctgcgcatcggc
gcgatcaccacggccgagtatctgatcccgccgtttctcgtgcgtttcaccgaatcgcgt
ccgcaggtgaaggtgcagttcaaggtcggcaatcgcgccgacatcatccgtatgctggct
acgcatgaaatcgatctcgcggtaatgggcagcgcgccgcgcgaattgcgcacggtagcg
accgcgttcgccaaacatccgatggcgttcgtcgcctcacccgcgcatgcgctgatgaag
aagaagcgcctgtcgctcgacgatctgcaaagcgccaatctgttcgtgcgggagcgcggt
tcgggcacgcgttccaccgtggagaatctgtttcgcctcgcgggcctcaagcttcatatc
ggctccgaactgtcgagcaacgaggcgatcaagcagttggtcgaggccggcctcggcatt
gcgtttctgtcgctgcacgcatgttcgctggagtttcaggcaggcctgctcgcgttgctg
ccgctgtcagccaatccgatcgaacgcgactggtatgtgatgcatgtatcggataaacgg
ctgccgcacgtggccagtctgttccgcgattttctgatcgagcacggcatgtccggcgcg
gtgccggtgccgctgccgaccgtcgccgctgcaaggaagcgccgccaggcgcgtcaggca
gacggcgcgtaa
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