Paraburkholderia dioscoreae: PDMSB3_1567
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Entry
PDMSB3_1567 CDS
T08115
Name
(GenBank) Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1567
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PDMSB3_1567
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_23
HTH_Crp_2
Gln_amidase_like
Motif
Other DBs
NCBI-ProteinID:
VVD28023
UniProt:
A0A5Q4Z956
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All DBs
Position
I:1612393..1613442
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AA seq
349 aa
AA seq
DB search
MARTSSPARTTQVAIVALPPVSMSGVGPIVDALNLANEIDGRALYRVQVCSWDGRAVPLS
GGAHWAADAAFGDAISCDWLIIVSERFQQFADYRLFLASLSRVGQRTPLVTGIHHGVWWL
AMAGQLSGYRVSVNWETYQQFSEQFERSIVTQQIFEIDRDRATCAGGQATVDFMLAMIGR
EHGPELADRIADTLGVGALRAGEERQRIPFVTAPGERHPRLNDALLLMEANIEDPLTTDE
IAGLVGVSRRQLERLFRQYLGSMPSKYYLGLRLSKARTQLQRTSKSVVQISLACGFSSAA
HFSNAYRERFGVTPREDRRNWIDRQTGASGAAASEPRPGALIERPDQAD
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacgtccagccctgctcgcaccacgcaagtcgccatcgtcgcgttgccgccc
gtgtccatgtcgggcgtcgggccgattgtcgatgcgctcaatctcgccaatgaaatcgac
ggccgcgcgctgtaccgcgtgcaggtgtgttcgtgggacggccgcgcggtgccgctttcg
ggcggcgcgcactgggccgccgacgccgccttcggcgatgcgatctcctgcgactggctg
atcatcgtcagcgagcggttccagcagttcgccgactatcgcctctttctggccagcctg
tcgcgcgtcggccagcgcacgccgctcgtcaccgggattcaccacggcgtatggtggctc
gctatggccgggcagttgtccggctaccgcgtgagcgtcaactgggaaacctatcagcag
ttctccgagcagttcgaacgctccatcgtcacgcaacagatcttcgaaatcgaccgcgat
cgcgcgacctgcgcgggcggtcaggcaaccgtcgacttcatgctggcgatgatcggccgc
gagcacggtcccgaactcgcggatcgcattgccgacacgctcggcgtgggcgcattgcgc
gcgggtgaggagcgtcagcgtattccgttcgtgaccgcgccgggcgagcgccacccgcgt
ctgaacgacgcattgctgctgatggaagcgaatatcgaggatccgcttaccaccgatgag
atcgcgggtctggtcggcgtgtcgcggcggcagttggaacgtctgtttcgccagtatctc
ggctcgatgccgtccaaatactacctggggctgcggctttcgaaagcgcgcacgcaattg
cagcgcaccagcaaatcggtggtgcagatcagtctggcttgcgggttttcgtcggcggcg
cacttttcgaatgcgtaccgcgaacgctttggtgtcacaccgcgcgaggatcgtcgtaac
tggatcgacaggcagaccggcgcgagcggcgccgcggccagcgagccgcggccgggcgcg
ctgatcgagcggccggatcaggcggattga
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