Paraburkholderia dioscoreae: PDMSB3_1641
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Entry
PDMSB3_1641 CDS
T08115
Symbol
ybaO
Name
(GenBank) putative DNA-binding transcriptional regulator with homology to Lrp
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1641 (ybaO)
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PDMSB3_1641 (ybaO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
Rrf2
HTH_27
LexA_DNA_bind
HTH_DeoR
HTH_Crp_2
DUF4423
GntR
TrmB
HTH_IclR
NdhM
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
VVD28097
UniProt:
A0A5Q4ZCA9
LinkDB
All DBs
Position
I:1684558..1685019
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AA seq
153 aa
AA seq
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MDIIDRKLLELLQADATMPIAELAQRVNLSQTPCWKRLQRLKEAGVIRAQVALCDARKLG
VGTTVFVAVRTNQHTEEWAQTFTRAVRDIPEVVEVYRMSGETDYLLRVVVSDIDDYDRVY
KLLIAAVPLYDVSSSFAMEQIKYSTALPVRYTV
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatcgaccggaagctgctggagttgctgcaagcggacgcgaccatgccgatc
gccgagctggcgcaacgcgtgaacctgtcgcaaacgccttgctggaagcggctgcagcgt
ctgaaagaggcgggcgtgatccgcgcgcaggtcgcgctttgcgacgcgcgcaagctcggc
gtgggcacgaccgtgttcgtcgcggtgcgcaccaatcagcacacggaggaatgggcgcag
acgttcacgcgtgcggtgcgggacattccggaagtcgtggaggtgtaccggatgagcggc
gaaaccgattacctgctgcgcgtggtggtgtccgatatcgacgactacgaccgcgtctac
aagctgctgatcgcggccgtgccgctatacgacgtgagttcgagcttcgcgatggagcag
atcaaatattcgacggctttgccggtgcgctatacggtgtag
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