Paraburkholderia dioscoreae: PDMSB3_1655.1
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Entry
PDMSB3_1655.1 CDS
T08115
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDMSB3_1655.1 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdio03000
]
PDMSB3_1655.1 (nifA)
Transcription factors [BR:
pdio03000
]
Prokaryotic type
Helix-turn-helix
Other families
PDMSB3_1655.1 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
GAF_3
AAA_16
AAA_3
Parvo_NS1
AAA_22
bpMoxR
AAA_7
DUF815
TM1506
Motif
Other DBs
NCBI-ProteinID:
VVD32939
UniProt:
A0A5Q4ZCM9
LinkDB
All DBs
Position
II:complement(1706646..1708358)
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AA seq
570 aa
AA seq
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MVNIQATVARQALDCVYEVSKTLVSSLDVAKTFRESLNYLLHTMEWRRAFVVLAESDGQL
RGLCAAGLSRDEQQRLQFRPGEGIVGRAFKSGIGVIVPDVNDEPVFLNRTGGADQMPGAC
IAMLATPIYADRRTLGVLAVDCVNPGASRLFADDLHLMKIVATLMGQALLLQRSVSAAHD
SMQDEVRRMQKAIKPSQQIDQVVGVSAAMQAVFGQVRQVAPARTTVLLRGESGTGKEVIA
RAIHNLSPRSGDSFVRVNCAALTESLLESELFGHEKGAFTGAQGQRKGRFELAHGGTLFL
DEIGDISPSFQAKLLRVLQEREFERVGGTTPVKVDVRLILATNRNLERMVKAGEFRADLY
YRINVVSIELPPLRERREDIPAMAQHFLARFNRENSQSIRFDAEAMRVLTNCYWPGNVRE
LENCVERTATMTRDGVIDRFKFLCQEDRCLTKVLHYIEREDAVRPARLVDIPIAEVSSPP
YGHHDLDVPSVPAAWSGGTDMDAETELDPATDERAFATSSAGKPEGERERLIWAMERCGW
VQAKAARLLGITPRQMGYALHKYAIEVRRF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacattcaggcaaccgtcgcccggcaagcactggactgcgtctatgaggtgagc
aagacgctggtttcgtcgctcgatgtggcgaagaccttccgcgagtccctgaactacctt
ctgcacacgatggagtggcgacgcgcctttgtggtgctggccgaatccgacgggcagttg
cgcggcctgtgcgccgcgggtctttcgcgcgacgaacagcagcgtctgcagtttcgtcca
ggggaaggcattgtcggccgcgcgttcaaaagcggcatcggcgtgatcgtaccggacgtg
aacgatgagccagtgttcctgaatcgcaccggcggcgcggaccagatgccgggtgcgtgc
atcgccatgctcgcgacgccgatctatgccgaccggcgcacgctgggcgtgctcgccgtg
gattgcgtgaatcccggcgcgagccggctgttcgccgacgacctgcatctgatgaagatc
gtcgccacgctgatggggcaggcgttgctgcttcagcgcagcgtcagcgcggcgcacgac
agcatgcaggatgaagtcagacgtatgcagaaggcgatcaagccgagccagcagatcgat
caggtggtcggcgtctcggcggccatgcaggcggtgttcggccaggtgcgccaggtcgcg
ccggcgcggaccacggtgctgttgcgcggtgagagcggcaccggcaaggaagtgatcgcg
cgcgcgatccacaatctgtcgccccgcagcggcgattcgttcgtgcgggtcaattgcgcg
gcgctgacagaatctcttctggagagcgaactgttcggtcacgagaagggcgcgtttacc
ggcgcgcagggacagcgtaagggccgtttcgaactggcgcacggcggcacgctgtttctc
gatgaaatcggcgacatctcgccgtcgttccaggccaaactgctgcgcgtgctacaggag
cgcgagttcgaacgcgtgggcggtacgacgccggtgaaggtcgatgtgcgtctgattctc
gccaccaaccgcaacctcgaacggatggtaaaggccggcgaatttcgcgcggatctctac
taccgcatcaacgtggtcagcatcgaattgccgccgctgcgcgagcggcgcgaagatatt
cccgcgatggcgcagcactttctcgcccgtttcaaccgcgaaaactcgcagtcgatccgc
ttcgacgccgaagcgatgcgggtgctgacgaactgctactggccgggcaacgtgcgtgag
ctggagaactgcgtcgagcgcacggcgaccatgacgcgcgacggcgtgatcgaccggttc
aagttcctgtgccaggaagaccgctgcctgacgaaggtgctgcactacatcgagcgcgaa
gatgccgtgcgtcccgcgcgcctcgtcgacattccgatcgccgaagtgtcgtcgccgccg
tacggccatcatgatctggacgtcccgtcggtgccggctgcctggtccggcggcacggac
atggacgccgaaaccgaactggatcccgcgaccgacgagcgcgcattcgcgacatcgtcg
gccggcaagccggaaggcgaacgcgaacgcttgatctgggcgatggaacgttgcggctgg
gtgcaggctaaagcggcgcggctgctgggcatcacgccccggcaaatgggctacgcgctg
cataaatacgccattgaggttcgccggttctga
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