Paraburkholderia dioscoreae: PDMSB3_1694
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Entry
PDMSB3_1694 CDS
T08115
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_1694 (truB)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PDMSB3_1694 (truB)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PDMSB3_1694 (truB)
Prokaryotic type
PDMSB3_1694 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
VVD28150
UniProt:
A0A5Q4ZKK7
LinkDB
All DBs
Position
I:1747173..1748108
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AA seq
311 aa
AA seq
DB search
MTASQRPRVPRRALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEAIDTREVTCDEAAIHAVLPAFLG
EITQVPPMYSALKRDGKPLYEYARAGQTLEREGRQVTILKLEILACALPDVTFRVTCSKG
TYVRTLAEDIGEALGCGAHLVALRRTGVGALTLENSVTLDALSDATESERDAWLQPVDAL
LSTFPLVQLNEDATRRFLHGQRLKLSELTITGDAVNAPRVRVYAAQGRLLGVAKQGEGVL
APERLVVTTAS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatctcaacgcccccgcgtgccgcgtcgcgcgctcgacggcgtgctgctgctc
gacaagccgctcggcctgtcgagcaacgacgcgctgattcgcgcgaagcgtctctatctg
gcaaaaaaagcgggccacaccggtacgctcgacccattggccaccggtttgctgccgctt
tgcttcggcgaagccaccaagttttcgcaggacctgctcgaagccgacaagacatatgaa
gccaccatgcgcctcgggattcgcacaaccaccggcgacgccgaaggcgaagcaatcgac
acacgtgaagtaacgtgcgacgaggcggcgattcacgcggtgctgccggcattcctcggc
gaaatcacccaggttccgccgatgtattcggcgctcaagcgtgacggcaagccgctgtac
gagtacgcgcgggcgggccagacattggagcgggaagggcgccaggtgacgatcctgaag
cttgagatactcgcctgcgcgttgccggatgtgacgtttcgcgtgacatgcagcaagggc
acgtatgtgcgcacgctggccgaagatatcggcgaggcgttgggttgcggcgcgcatctg
gtggcgctgcgacgcacgggcgtcggcgcgctgacgctcgaaaattcggtgacgctcgac
gcgttgtccgacgccaccgaaagcgagcgcgacgcctggctgcagccggtagatgcgttg
ctgtccacattcccgctcgtgcagctaaacgaggacgcgacgcgccgctttctacacggt
cagcggttgaaactgtccgagttgaccatcacgggcgacgcggtgaatgcgccgcgtgtt
cgggtgtacgccgcgcaagggcgtctgcttggcgtcgcgaagcagggcgagggcgtgctg
gcgcccgagcggctggtcgtcaccacagcaagctaa
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