Paraburkholderia dioscoreae: PDMSB3_1789.1
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Entry
PDMSB3_1789.1 CDS
T08115
Symbol
glgX
Name
(GenBank) Glycogen operon protein GlgX homolog
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00500
Starch and sucrose metabolism
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
Module
pdio_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PDMSB3_1789.1 (glgX)
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PDMSB3_1789.1 (glgX)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
DUF3459
Glyco_hydro_31_2nd
ISOA1-3_C
SLS1_N
GHL5
Motif
Other DBs
NCBI-ProteinID:
VVD33073
UniProt:
A0A5Q4ZI95
LinkDB
All DBs
Position
II:complement(1848552..1850768)
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AA seq
738 aa
AA seq
DB search
MSSQANYSTRIAEGTPFPLGATWNGSGVNFALFSAHATKVELCLFDETGENEIERIELPE
YTDEVWHVFVPNLKPGAVYGYRVHGPYEPEKGHRFNPNKLLLDPYAKAHIGELKWAPEIF
GYTLDSEEGDLSFDERDSAPFVPKCKVVDANFSWSHPERNALPWERVIFYEAHVRGFTKR
HPEVPENLRGTFAGLGQRVVLDYIKNLGVTSVELMPIQTFVNDSYLLDKGLTNYWGYNTI
GFFAADPRFFASSIDSVGEFKEMVDRFHNANLEVILDVVYNHTAEGNERGPTISFKGIDN
ASYYRLMPDEPRYYINDTGTGNTLNLSHPRVLQMVTDSLRYWVTEMKVDGFRFDLATILG
RELHGFDEGGGFLDSCRQDPVLSSVRLVAEPWDCGPGGYQVGGFPPGWAEWNDRFRDTVR
EYWKGDEGKVPDLATRLTGSGDKFNHRGRRPWASVNFIAAHDGFTLNDLVSYNDKHNEAN
GEDNKDGHSDNKSWNMGVEGPTDDPGIRQQRERQKRNLLATLLLSQGSPMILAGDEFGRT
QKGNNNAYCQDNEISWVDWEAIDDDGRALTEFVRNLTTLRHRLPVLRRGRFLTGEYNEAL
DVTDARWISPEGKDLSQEQWDDASMRCFGLVIDGRAQASGIRRPASDATLLLVLNAHHDV
VNFTLPDIPEGQRWTCLLDTNMPVRSELPHFAAGDAYQVTARSLLLLALEAPSLATQRVF
DRLEEQLTTEDSEPPAEA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccaagccaactactcgacgcgcatcgcggaaggcacgccttttccgctcggc
gcgacatggaacggaagcggcgtcaacttcgcgcttttctcggcgcacgccaccaaggtc
gaactgtgtctgttcgatgaaaccggcgaaaacgaaatcgagcgcatcgaactgccggaa
tacaccgacgaggtgtggcacgtgttcgtgccgaatctcaaaccgggcgcggtctacggt
tatcgcgtgcacggcccttacgagcccgagaaagggcaccgcttcaatccgaacaaactt
ctgcttgatccgtatgcgaaagcgcatatcggcgagctcaaatgggcgccggaaattttc
ggctatacgctggattccgaagagggcgacctgtcgttcgacgagcgcgacagcgcgccc
ttcgtgccgaaatgcaaggtggtcgacgccaatttttcgtggagtcaccccgagcgcaat
gcattgccgtgggaacgcgtgattttttatgaagcccatgtgcgcggatttaccaaacgg
catccggaagtaccggaaaatctgcgcggcacgttcgccggactcgggcagcgggtcgtg
ctcgactacatcaagaacctcggcgtgacgtcggtggaattgatgccgatccagaccttc
gtcaacgacagctatctgctcgataagggtctcaccaactactggggctacaacaccatc
ggttttttcgcggccgatccgcgtttcttcgcgtcgtcgatcgattcggtgggcgagttc
aaggagatggtggaccgcttccacaacgccaatctcgaagtcattctcgacgtggtctac
aaccacacggccgaaggcaacgaacgcgggccgaccatctcgttcaaaggtatcgacaac
gcgtcgtattatcggctgatgcctgacgagccgcgctactacatcaacgacaccggcact
ggcaacacgctgaacctgtcgcatccgcgcgtattgcagatggtgaccgacagcctgcgc
tactgggtgacggaaatgaaagtggacggtttccgtttcgacctcgccacgattctcggc
cgcgaactgcacggtttcgacgaaggcggcggctttctcgacagctgccggcaggacccc
gtgctgtccagcgtgcggctggtggccgagccgtgggattgcggtcccggcggctatcag
gtgggcggctttccgcccggctgggcggaatggaacgaccgctttcgcgataccgtacgc
gaatactggaagggcgacgaaggcaaggttcccgatctcgccacgcggctcaccggttcg
ggcgacaagttcaaccatcgcggccgccgcccgtgggccagcgtgaacttcattgccgcg
cacgacggcttcacgctcaacgatctggtctcgtacaacgacaaacacaacgaagccaac
ggcgaggacaacaaggacggccactcggacaacaaatcctggaacatgggcgtggagggc
ccgaccgacgatccgggcattcgtcagcaacgcgagcggcagaagcgcaatctgctcgcc
acgctgctgctttcgcaaggctcgccgatgattctcgcgggcgacgaattcggccgcacg
cagaagggcaacaacaacgcctattgtcaggacaacgagatcagctgggtcgattgggaa
gcgatcgacgacgatggccgcgcgctcaccgagttcgtcaggaatctgaccacgctgcgc
caccgtctgccggtgctgcggcgcggccgttttctgaccggcgaatacaacgaggcgctc
gacgtgaccgacgcccgctggatctcgccggagggcaaggatctctcgcaggagcagtgg
gacgatgcttccatgcgctgctttggtctcgtgatcgacggccgcgcgcaggcgagcggc
attcgccgtccggcgtcggacgcgactttgctgctggtgctgaacgcgcatcacgacgtc
gtcaatttcacgctgcccgacattcccgaggggcagcgctggacttgtctgctcgacacc
aacatgccggtgcgctccgagttgcctcacttcgcggccggcgacgcgtatcaggtgacc
gcccgctcgctgctgctgcttgcgctggaagcgccgagcctcgccacgcagcgcgtattc
gaccgcctcgaagaacagctgaccaccgaggatagcgaaccgcccgcagaagcctga
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