Paraburkholderia dioscoreae: PDMSB3_1885
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Entry
PDMSB3_1885 CDS
T08115
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00630
Glyoxylate and dicarboxylate metabolism
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PDMSB3_1885 (gcl)
Enzymes [BR:
pdio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
PDMSB3_1885 (gcl)
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GFIT
Motif
Pfam:
TPP_enzyme_C
TPP_enzyme_M
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
VVD28341
UniProt:
A0A5Q4ZBF7
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All DBs
Position
I:complement(1936556..1938331)
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AA seq
591 aa
AA seq
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MAKMRAVDAAVLVLEKEGIDTAFGVPGAAINPFYSAMRKAGNISHVLARHVEGASHMAEG
YTRAQPGNIGVCIGTSGPAGTDMITGLYSAQADSIPILAITGQAPRARLYKEDFQAVDIE
SIAKPVTKWAVTVREPALVPRVFQQAFHLMRSGRPGPVLVDLPIDVQLAEIEFDIDTYEP
LPVYKPKATRKQIEAVLTLLNDSDKPLLVSGGGVLNAAAEDLLVTFAETVGVPVIPTLMS
WGAIPDDHPLMAGMVGLQTSHRYGNATMLASDFVLGIGNRWANRHTGSVEVYTKGRKFVH
VDIEPTQIGRVFGPDLGIVSDAKAALELFVEVAKEWKAAGKLKDRSAWVADCQQRKRTMH
RKTHFDNVPMKPQRVYEEMNQVFGRDTCYVSTIGLSQIAGAQFLHVYKARNWINCGQAGP
LGWTIPAALGVRAADPQRPIVALSGDYDFQFMIEELAAGAQFKLPYVHVVVNNSYLGLIR
QAQRAFDMDFCVQLGFENINSPETNGYGVDHVAVAEGLGCKAIRVFKPEELKPALQRAQA
MLSEFNVPVIVEVILERVTNISMGTEIDAINEFEELATTREDAPTAISMLD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgagagccgtcgacgcagccgtgctggtgctcgaaaaagaaggcatcgac
actgcattcggcgttccgggcgcagcgatcaacccgttctactcggccatgcgcaaggcg
ggcaacatcagccacgtgctggcccgccacgtcgaaggcgcgtcgcatatggccgaaggc
tatacgcgcgcccagccgggcaacatcggcgtgtgtatcggcacgtcgggccccgccggc
accgacatgatcaccggtttgtactcggctcaggccgactcgattcctattctcgccatc
acgggccaggcgccgcgcgcgcgtctgtacaaggaagacttccaggccgtcgacatcgaa
tcgatcgccaagcccgtcaccaagtgggccgtcaccgtgcgtgagccggcgctggtgccg
cgcgtgttccagcaggcattccacctgatgcgctcgggccgtccgggtccggtgctggtc
gatctgccgatcgacgtgcagctcgccgaaatcgaattcgacatcgacacatacgaaccg
ctgccggtctacaagcccaaggcgactcgcaagcagatcgaagccgtcctcacgctcctc
aacgactcggacaagccgctgctcgtctcgggcggcggcgtgttgaacgcggcggccgaa
gacctgctcgtcacgtttgctgaaaccgtcggcgtgccggtgattccgacgctgatgtcg
tggggcgcgattcccgacgaccatccgctgatggccggcatggtcggcctgcaaacctcg
caccgctacggcaacgcaacgatgctcgcctccgacttcgtgctcggcatcggcaaccgc
tgggcgaaccgtcacacgggcagcgtcgaggtttatacgaagggccgcaagttcgtgcac
gtggacatcgagccgacgcagatcggccgcgtgttcggcccggacctcggcatcgtgtcg
gacgcgaaagccgcgctcgaactgttcgtggaagtggcgaaggaatggaaagccgcgggc
aagctgaaggaccgcagtgcatgggtcgccgactgccagcaacgcaagcggaccatgcac
cgcaagacccacttcgacaacgtaccgatgaagccgcaacgcgtgtacgaagagatgaac
caggtgttcggccgcgacacgtgctacgtgagcacgatcggtctctcgcagatcgccggc
gcacagttcctgcatgtgtacaaggcgcgcaactggatcaactgcggccaggcgggcccg
ctcggctggaccattccggcagcgctcggcgtgcgtgcggccgatccgcaacgcccgatc
gtggcgctctcgggcgactacgacttccagttcatgatcgaagagctggcggccggcgcg
caattcaagctgccgtatgtgcacgtggtggtgaacaactcgtacctcggcctgatccgc
caggcccagcgcgcgttcgacatggacttctgcgtgcagctcggcttcgagaacatcaac
tcgccggagacgaacggctacggcgtggaccacgtcgcggttgcggaaggtctgggttgc
aaggcgatccgcgtgttcaaaccagaagagctgaagcccgcgctgcagagagcgcaagcc
atgctctccgagttcaacgtgccggtgatcgtcgaagtgattctcgaacgcgtgaccaac
atttcgatgggcaccgagatcgacgcaatcaacgagttcgaagagctggccacgactcgc
gaagacgcaccgaccgcgatcagcatgctcgactga
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