Paraburkholderia dioscoreae: PDMSB3_1936
Help
Entry
PDMSB3_1936 CDS
T08115
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03030
DNA replication
pdio03430
Mismatch repair
pdio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDMSB3_1936
03430 Mismatch repair
PDMSB3_1936
03440 Homologous recombination
PDMSB3_1936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdio03032
]
PDMSB3_1936
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_1936
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDMSB3_1936
DNA replication proteins [BR:
pdio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDMSB3_1936
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDMSB3_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
Mg_chelatase
AAA_18
TsaE
AAA_assoc_2
AAA_2
DUF3646
PIF1
Cdc6_lid
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
VVD28392
UniProt:
A0A5Q4ZL24
LinkDB
All DBs
Position
I:1983470..1986328
Genome browser
AA seq
952 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSAPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYDVQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALADGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFAEALSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APMGGGGGAVGAARAPGQSGAGGARRAGAPAVAAQQGASGSPVSQARPVAASSAVPGTSR
EAQVSAAAPGRETQPGKVVVADKGVVVEAAPVESATRAMAQADSTVEVQPAAGDVQDAAA
DSAQGAIAGQPPVAEPAIVAEPAPVIDELEPTPTSAAAAAPVPALAPWDDAPVNSAAGEV
SAAIGLNDPASSDVSAAAGSKGAASNGVSASAGLNESASSEASAIADLNGAAQNGASATA
TLNDETRAGEAPAYSLSAPAAAAFARTEQAAAAAPSQELPPVADTAPRRAGGASAALDVL
RSAGLKVSSDRGRASAATAAKPGAPATPKPAAPRVVVPVPTPGAPRRAPQQDAAPAAPAA
RAAGSASSSLAHRNGAEQNGSSVPPWDDMPPPDEYMPLTAADEGYYGLPDDGYMPVFDSG
PDDVRVSAAPAPASTPAPAPVIDQRPLPPAVPLDPLGFKGDWPALAVDLPLKGISYQLAF
NSELMALEGNTLKLNVPVPQYAEASQVAKLKTALADRLGQTVEVLVEVGPARRTAAAHDA
AMRAQRQQQAEREIGADPFVQSLIREFGASIVPGSVRPITPDAGSNGAPSVH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcttcgctcgtcgga
caggagcatgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcaccatgcc
tatctgtttaccggcacacgcggcgtcggcaagaccacgctgtcgcgcatcttcgccaag
gcgctgaattgcgaaactggcgtgacctccgcgccgtgcggcgtatgccgcgcgtgccgc
gagatcgacgaagggcgttttgtcgattatgtggagatggacgcggcgagtaatcgcggc
gtcgacgaaatggctgcgctgctggagcgcgccgtttatgcgccggtggatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgaccaaccacgccttcaacgcgatgttg
aagacactggaagaaccgccagcgcacgtcaagttcattctcgccaccacggatccgcaa
aagattccggtcacggtgctctcgcgctgtctgcaattcaatctgaagcagatgcccgcc
ggtcatatcgtctcgcatctcgagcacattctcggcgaagaaaaggtgccgtacgacgtc
caggcgctgcgcctgctcgcgcgcgcggccgacggctcgatgcgcgacgcgctctcgctg
accgatcaggcgattgcctactcggccaaccaggtcaatgaagaagcggtgcgcggcatg
ctcggcgcgctcgaccagagctacctgatccgcctgctcgatgccctcgctgacggcgac
ggcgccgcggtgctgtcggtggccgacgagatggcgttgcgcagcctgtcgttttcgacg
gcattgcaggatctggcgagtctgctgcaccggattgcgtgggcgcagttcgcgccgtcg
tcggtgctggacgagtggcccgaggcgggtgatctgcgccgcttcgccgaagcgctgagc
gccgagcaggtgcaattgttctatcagatcgcgaccatcggccgaagcgaactgggtctc
gcgccggacgaatacgccggcttcaccatgacgctgctgcgcatgctcgcgttcgaaccg
gcgcctatgggcggcggcgggggggccgtgggtgcggcgcgtgcgccgggccagtccggc
gcgggcggagcgagacgcgccggtgcgccggccgtggccgcgcagcagggtgcgtcgggt
tcgcccgtttcacaggcgcggccggtagcggcttcgagcgcagtgccggggacttcgcgt
gaagcgcaggtgagcgctgccgcgccgggccgcgaaacacagccgggtaaagttgttgtg
gccgataagggcgtcgtggttgaggcagcgccggttgaatcggcaacgcgcgccatggcg
caagccgacagcacggttgaagtgcagcctgcggctggcgacgttcaggatgccgcggcg
gattctgctcaaggcgcgatcgccgggcagccgcctgtcgcagaaccggcaatagttgca
gagccggcgccggttatcgatgaattggaaccgacaccgacgtccgcggcggctgccgcc
ccggtacccgcgttggctccatgggacgatgcccccgtcaactcggcagcgggcgaagtg
tccgcagccattggcctcaacgatcctgcttcgagcgatgtctccgcggccgcaggctcc
aaaggtgcggcttcgaatggagtctccgcgtccgctggccttaacgaatctgcttcgagc
gaagcctccgcaatcgctgatctcaacggtgcggcccagaacggagcctccgcaaccgca
actcttaacgacgaaacacgcgccggcgaagctcccgcatattcgctgagcgcaccggca
gccgccgcgtttgcgcgcacggagcaagccgcggctgcggcgccgtcgcaagaactaccg
cccgtagccgatactgcaccccgtcgcgcgggcggtgcgagcgccgccctcgacgtcttg
cgcagcgccggtttgaaagtgtcgtcggaccgtggccgcgcgagcgcggcaactgccgcg
aagcccggcgcgccggccacgccgaaacccgccgccccgcgcgtcgtcgttcccgtgccg
acgccgggcgcgccacgccgtgcgccgcagcaggatgccgcaccggcagcacctgccgcg
cgcgcggcaggatcagcgtcttcgtcgctagcgcaccgcaacggcgctgagcagaatggc
tcgtcggtgccgccgtgggatgacatgccgccgcctgacgaatacatgccgctcacggcc
gccgacgaaggctattacggcctgccggacgacggctatatgcccgtgttcgacagcggc
ccggacgatgtccgcgtgagcgccgcgccggcgcccgcgtcgacgccggcgccggcgccg
gtgatcgaccaacgtccgctgccgcccgccgtgccgctcgatccgctgggcttcaagggt
gactggccggcgcttgccgtcgatctgccgctcaagggcatttcgtatcagctcgcgttc
aacagcgaactcatggcgctcgaaggcaatacgctcaaactgaacgtgccggtgccgcag
tacgctgaagcctcgcaggtcgctaaactgaaaaccgcgctcgccgacaggctcggccag
actgtcgaggtgctggtcgaagtcggtccggcgcgccgtacggccgccgcccacgacgcc
gccatgcgcgcacagcggcagcagcaagccgagcgcgagatcggcgccgatccgttcgtg
cagtcgctgatccgcgagttcggcgcgagcatcgtgcccggctcggtccgcccgattact
ccggacgccggttccaacggagcgccgtcggtccactga
DBGET
integrated database retrieval system
